Plasmodium falciparum 3D7: PF3D7_0409600
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Entry
PF3D7_0409600 CDS
T00095
Name
(RefSeq) replication protein A1, large subunit
KO
K07466
replication factor A1
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03030
DNA replication
pfa03420
Nucleotide excision repair
pfa03430
Mismatch repair
pfa03440
Homologous recombination
pfa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PF3D7_0409600
03420 Nucleotide excision repair
PF3D7_0409600
03430 Mismatch repair
PF3D7_0409600
03440 Homologous recombination
PF3D7_0409600
03460 Fanconi anemia pathway
PF3D7_0409600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfa03000
]
PF3D7_0409600
03032 DNA replication proteins [BR:
pfa03032
]
PF3D7_0409600
03400 DNA repair and recombination proteins [BR:
pfa03400
]
PF3D7_0409600
Transcription factors [BR:
pfa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PF3D7_0409600
DNA replication proteins [BR:
pfa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PF3D7_0409600
DNA repair and recombination proteins [BR:
pfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PF3D7_0409600
MMR (mismatch excision repair)
PF3D7_0409600
DSBR (double strand breaks repair)
HR (homologous recombination)
PF3D7_0409600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
812392
NCBI-ProteinID:
XP_001351411
PlasmoDB:
PF3D7_0409600
UniProt:
Q9U0J0
LinkDB
All DBs
Position
4:complement(452134..455571)
Genome browser
AA seq
1145 aa
AA seq
DB search
MMSKNEEILSKATPNFIYKFFTEPNSQESLKWLNGEINLICFSQMNAGANQTFLKVIDGS
IPPQYYAIVHLGIEENNSTISYVKKIISIENFSITNYYGKLFILAKKVTVYLNIDHFDIE
DLFKKYHLQSISYFLLNSKNENNSRENYSRIVKDSNNNMNNVNNVNNVNNMNNMNSMNSV
NNMNSMNSMNNSTHNVGSSNGGAGGYNNRDDNKLRENYTHSNDDNINHTNIKDNYYYSRD
NNYHNNNNINNSSSSRGEKWEQVRDNYKSNEYFNNNGKAYNHNVHNRQNSEHIMKENNNK
NFTTPIHMNEDNRIDKQQNYMDNNNNNNMDKPNRGKFVYKENPNIPNYTNVNDYESKNNL
HKPFPVQKSASAYKGPSEYSEYNRNNMCYENNSPGNEAYNKNSRAYINKNNYDNNNNNNN
NYYYYHHHNNMNTNSRQATNNQPYDYNNHNRDYDNKNVNKYSDGIKDNSCYNKNEESSKM
YMNSNCLPHTTSIVKLNRCDESLHERYFSIDNNNNMNNMSNVNNMSNVNNVNNVNNVNNV
NNVNNVNNVNNVNNVSNNNSVIMDHPSGNYNHENDPNNHHNYNNHNNYHTYDRHVNPSNN
HQHYNNKDEYTYTNNEDCHLKIRKDDMGSNQESRDYNYYDENSMDNIMKKDEKILKDKTL
NRNNRKITPYQSNAVIKMNDGILMQINKLSQYSSKWIIKARVQSKDNIRRYTSGSKEGKV
FNIELCDEDGEIKANFFGKAVDKWFDFIEVGKIYKISKGMIKVANKKFNTLNHDYEITLD
ENSLIEILDEENENIPKYNYNFISIDNIKNMNTGSFVDIIAVVLNYQEKMQIFVKKTGQY
KDKRDVTLIDESFDTIQVTLWEKNATIIDEMNLRDNCIVCFKYLKIGEWQGKKLESHART
KIEINPDNIEKAYILKNWWIHNKKMICNSINLSSNYINIETQKTIQEIKKNVNLVNEEAL
SGKGIMFTTYGFIDQIYNNMPVYSACPDCNKKMISNSVDDNEYEPSSNLLEETMYCAKCN
KNNIPVYNYYINLKITDSTDSIRASAFANCAKIIMNGLSAEEYMKLRQEYIMQENIENFD
IIEKIKLNEFFFRIKVYMTSHMDELKKNYTIIDIAPVGKLLIDNCRYLIKSIKNLTSKRD
TDHDE
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtaagaacgaagagatcctatcaaaggcaacgccaaattttatttacaaattt
tttacagaacccaattctcaagaatcgttaaagtggttaaatggagaaatcaatttaata
tgctttagtcaaatgaatgcaggagcaaatcagacttttttaaaagtcatagatggttcg
atcccacctcagtattatgctatagtacatttaggaattgaagaaaataatagtacaata
tcttatgtaaagaaaataattagtattgaaaatttttctatcacaaattattatggtaaa
ttatttattttagcaaaaaaagttacagtatatttaaatattgatcatttcgatattgaa
gatttatttaagaagtatcatttacaaagtatatcttattttttattaaattcgaaaaat
gaaaataattcaagagagaactactccagaatagtaaaggattctaataataatatgaac
aatgtgaataatgtgaataatgtgaataatatgaataatatgaacagtatgaatagtgtg
aataatatgaacagtatgaacagtatgaataatagtacacataatgttggaagtagtaat
gggggtgctgggggatataataatagagatgataataaattaagagagaattatacacat
tcaaatgatgataacattaatcataccaatataaaggataattactactactcaagggat
aataattatcataataataataatattaataatagtagtagtagtagaggtgaaaaatgg
gaacaagtcagagataattataaatccaatgaatattttaataataatgggaaagcatat
aatcataatgtacataacagacaaaacagtgaacacattatgaaagaaaataataacaaa
aattttacgacaccaattcatatgaatgaagataatagaatagataaacaacaaaattat
atggataataataataataataatatggataaaccaaatagaggaaagtttgtttataaa
gagaaccctaatatacctaattatacaaatgtaaatgattatgaaagtaaaaataattta
cataaaccatttcctgtacaaaaaagtgctagtgcttataaaggaccttctgaatattct
gaatataatagaaataatatgtgttatgaaaataattctccaggcaatgaagcctataat
aaaaatagtagagcctatattaataaaaataattacgacaacaacaataataataataat
aattattattattatcatcatcataataatatgaatacaaattcgagacaagccaccaat
aaccaaccatatgattataataaccataatagagattatgataataaaaatgtaaataaa
tattctgatggtataaaagataattcgtgttataataaaaatgaggaatcatcaaaaatg
tatatgaattcgaattgtttacctcataccacaagtattgtaaaattgaatcgatgtgac
gaatcattacatgagagatatttttctatagataataataataatatgaataatatgagt
aatgtgaataatatgagtaatgtgaataatgtgaataatgtgaataatgtgaataatgtg
aataatgtgaataatgtaaacaatgtgaataatgtaaacaatgtgagtaataataatagt
gtgattatggatcatccaagcgggaactataatcatgaaaacgatccaaataaccatcac
aattacaataatcataataactatcatacatatgatagacatgtgaacccatcaaacaat
catcaacattacaataataaagatgaatatacatacacaaataatgaggactgtcatctg
aaaataagaaaagacgatatgggaagtaaccaagagtcaagagattataattattatgat
gagaatagtatggataatataatgaaaaaagatgaaaaaatattaaaagataaaacatta
aatagaaataacaggaaaattactccttatcaaagtaatgctgttataaaaatgaatgat
ggtatattaatgcagataaataaattatctcaatattcctcgaaatggattattaaggcg
agagtacaatcaaaagataatattagaagatatacatccggaagtaaagaagggaaagtt
tttaacattgaattgtgtgatgaagatggagaaattaaagccaatttttttggaaaagct
gttgataaatggtttgattttatagaagttggtaaaatatataaaattagtaaaggtatg
ataaaggtagcaaataaaaaatttaatactttaaatcatgactatgaaattactttagat
gaaaactccttaatcgaaatattagatgaagaaaatgaaaatattccaaaatataattat
aattttatatctatagataatattaaaaatatgaatactggctcatttgttgatattata
gctgtagtattaaattatcaagaaaaaatgcagatttttgtaaaaaaaacaggacaatat
aaagataaaagagatgttaccttaatagatgaaagttttgatacaatacaagtaaccttg
tgggaaaaaaatgcaaccattatcgatgaaatgaatttaagagataattgtattgtatgc
tttaaatatttaaaaattggagaatggcaaggaaaaaaattagaatcacatgcacgtacc
aaaattgaaattaatcctgataatatagaaaaagcatatattctaaaaaattggtggatt
cataataaaaaaatgatatgtaattctataaacctaagttcaaattatattaatattgaa
acacaaaaaactatacaagaaattaaaaaaaatgtaaatctagtaaatgaagaagcatta
tctggtaaaggtatcatgtttactacttatggttttatagatcaaatatataataatatg
cctgtctattcagcttgtccagattgtaataaaaaaatgataagtaattccgttgatgat
aacgaatatgaaccttcttcaaatctattagaagaaactatgtattgtgcaaaatgtaat
aaaaataatatacctgtctataattattatattaacctaaaaataacggatagcacagat
tctataagagcttcagcctttgctaattgtgctaaaattattatgaacggattgtctgct
gaggaatatatgaaattaagacaagaatatataatgcaagaaaatatagaaaactttgat
attatagagaaaatcaaattaaatgaattcttttttcgtataaaagtatatatgacatct
catatggacgagttgaaaaaaaattacacaataatagatattgcacccgttggaaaactt
ttgatagataattgtaggtaccttatcaaatctataaaaaatctaacctctaaaagggac
acagatcatgacgaatga
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