Plasmodium falciparum 3D7: PF3D7_0410400
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Entry
PF3D7_0410400 CDS
T00095
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PF3D7_0410400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfa03019
]
PF3D7_0410400
Messenger RNA biogenesis [BR:
pfa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PF3D7_0410400
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PF3D7_0410400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
812382
NCBI-ProteinID:
XP_001351417
PlasmoDB:
PF3D7_0410400
UniProt:
Q9U0I4
LinkDB
All DBs
Position
4:474542..475558
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AA seq
338 aa
AA seq
DB search
MMDILITTPYDKEVCEIGEITNKIISLETVKHTKSSLHKNRDIQCPNKKKLVLPGECVLD
KNDKDRFLKGGGLYEEDDMFYACILGRVNYINKLIYVEPLKGKYTGSVGDLLVGKIKDIS
NDKWIVEIGSYCRAYLSISQTNISIFSQRIRLYNDVINMIHIYKPDDIIACEIQRISTDG
TIILHTRSSIYGKLSNGVLIIVPQTLIHNQKKHIFVFPCNVQIILGMNGYIWISSPIKKS
KDTNPNSVDQNIEENKFEDVDHTTRKNITIITNIIKLLVKYHININYDTINKIYVHYTSN
TNNTPSYILKPYVADSYLFNYIDKFVSSNQSWAANSTQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatggatatccttatcaccacgccgtatgataaagaagtttgcgaaataggagaaatt
actaacaagataatttctctagaaactgttaagcatacaaaaagtagtttacataaaaac
cgggatatacaatgtcccaacaaaaagaaacttgtgttaccaggagaatgtgttttagat
aagaatgataaagatcgttttttaaaaggcggtggtttatatgaagaagatgatatgttt
tatgcatgtattttaggtagagtgaattatattaataaattaatatatgtagaaccttta
aaaggaaagtatacaggttctgttggtgatttattagttggtaaaattaaagacataagt
aatgataaatggattgtagagataggttcatattgtagagcttatctttccatatctcaa
actaatataagtatatttagtcaaagaattagattatataatgatgttataaatatgata
catatttataaacctgatgatattattgcatgtgaaattcaaagaatatcaacagatggt
actattattctacataccagatcatctatttatgggaaattatcaaacggcgttttaatt
attgtcccacaaactttaatacataatcaaaaaaaacatatttttgttttcccttgtaat
gttcaaattatattaggaatgaatgggtatatatggatttcttcacctatcaaaaaatca
aaagatactaatcctaatagtgttgatcaaaatattgaagaaaataaatttgaagacgtt
gatcacaccaccagaaaaaatattactataattactaatattattaaattacttgtcaag
tatcatatcaatattaattatgatactattaataaaatatatgtacattatacatcaaac
acaaataatacgccctcatatattttaaagccttatgtagccgattcgtatttgtttaac
tatatagataagtttgtaagctccaaccagtcctgggcagctaactcaacacaataa
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