Plasmodium falciparum 3D7: PF3D7_0606500
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Entry
PF3D7_0606500 CDS
T00095
Name
(RefSeq) polypyrimidine tract-binding protein, putative
KO
K14948
polypyrimidine tract-binding protein 2
Organism
pfa
Plasmodium falciparum 3D7
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfa03041
]
PF3D7_0606500
Spliceosome [BR:
pfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
PF3D7_0606500
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_occluded
RRM_8
RRM_10
RRM_ACIN1
RRM_11
Motif
Other DBs
NCBI-GeneID:
3885785
NCBI-ProteinID:
XP_966055
PlasmoDB:
PF3D7_0606500
UniProt:
C6KSR3
LinkDB
All DBs
Position
6:complement(join(265839..265925,266045..266248,266398..266655,266807..266943,267094..268399))
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AA seq
663 aa
AA seq
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MNKRTLSDDRNTREKNKVGVKRYLMSSDDIYDNPKLYHEKNNGGSKINMSTFLEINEDGM
LYDNHNNNIMNGHNNDMCDLSNNNNNNNIFNSLNKIDNNNNIKDNEVNKINNENNNNNIM
NNINNINNNSNNNNNNNNNNGNNCLSTKYYSNDCKKRKGSRYTSSLPFLKKEKNNGNTVL
LLKNVPEKVDEEDIISFMRPFLRNKNPEIIFDGQDIIVKLYDDELIESIYTYFNEHPTQI
KGSFVKVKLSHIIDDNKESMEEQNDILNNYNNNNNNYSSSSSNNNNYSFYHTNHNNHPTD
VLDKRNSKSNKAECSKVILVSVINLHYPVDIELIYYLFSKCGTVEKIITFSRNPVLYQAL
VQFDNVETAKEAIKTLHNRNIYDGCNTINIQYSFLKELVIKGNNSSSWDYTISNEKKTKN
FPVLQNSHGVLPTPSRKSVDSELYQLMEKKFKLVDFEKMNPSKTPVLICYNIPKEYTDVN
KLFNLFSIYGFVTRIKILREKPDAALIQYSNYIFSSLAQEYLQRARISNQSIEVNFSKIH
DIRVSQRQQNNESHNTKIFSNYDQRYVLSDQGKYIKAACRPTKCLFISNLNENVNEDCVM
NLFNKYGNINKLQFLPVKEGKRHLSIIVEMNTEDMATKALMDLHNFYLKDRYIKVSYTKS
RLM
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacgaaccctttcagatgatcggaacaccagggagaaaaataaagtaggagtt
aaaagatatttaatgagtagtgatgacatttatgataaccctaagctatatcatgaaaaa
aataatgggggttctaaaataaatatgagtacttttcttgaaataaatgaagatgggatg
ctatatgataaccataataacaacataatgaatggtcataataatgatatgtgtgattta
agcaataataataataataataatatttttaatagtttaaataaaattgataataataat
aatataaaagataatgaagttaataaaataaataacgaaaacaataataacaacatcatg
aataatattaacaacattaacaataatagcaacaacaacaataataataataataataat
ggtaataattgtttatcgacaaaatattattcaaatgattgtaaaaaaaggaaaggaagt
agatatacgtcatcccttccttttttaaaaaaagaaaaaaataatggtaatactgtttta
cttttaaaaaacgtaccagagaaagtagatgaagaagatatcatatcttttatgagacca
tttttaagaaataagaatccagaaattatatttgatggacaagatattatagttaaatta
tatgacgatgaattaattgaaagtatatatacatattttaatgagcacccaactcaaata
aaaggctcttttgtaaaggtaaaattatctcacattattgatgataataaggaaagtatg
gaggaacaaaatgacatattaaataattataataataataataataattatagtagtagt
agtagtaataataataattattctttttatcatactaatcataataaccatcctacagat
gtattagacaaaagaaatagcaaatcgaataaagctgaatgctctaaagttatcttagtt
tcagttattaatttacattatcctgttgatatagaattgatttattatttatttagtaaa
tgtggaacagtagaaaaaataattacgttttctagaaatcctgttctttatcaagcacta
gtacaatttgataatgtagaaacagcaaaagaagctatcaaaacgttacataatagaaat
atatatgatggatgtaatacaataaatattcaatactcatttctaaaagaattagttatc
aaggggaataattcaagctcatgggattataccatatctaatgaaaagaaaaccaaaaat
ttcccagtacttcaaaattcgcacggagttcttccaaccccttcacgaaaaagtgtagat
tctgaattatatcaattaatggaaaaaaaattcaaattagttgactttgaaaaaatgaat
ccgtccaaaacacccgtcctaatttgttataacataccgaaagaatacacagatgttaat
aagttatttaatctctttagcatttacggatttgttacgagaataaaaattttaagagaa
aaaccagatgctgcccttatacaatattcaaattacatattttcttcattagctcaagaa
tatttacaacgtgctagaataagtaatcaaagcatagaagtaaacttttctaaaatacat
gatataagggtttctcaaagacaacaaaataatgaatcccacaatactaaaatatttagt
aattatgaccaacgatatgtgttgtcagatcaggggaaatatatcaaggccgcatgcaga
ccaacaaaatgtttatttatatcaaatcttaatgaaaatgttaatgaagattgtgtaatg
aatttatttaacaaatatggaaatataaacaaattgcaatttcttcctgtcaaggaaggg
aaaagacacctctctattattgtagaaatgaatacggaagatatggcaacgaaggcatta
atggatctacataatttttatttaaaagatcgatatataaaagtatcgtatacaaaatct
agattaatgtaa
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