Plasmodium falciparum 3D7: PF3D7_0623600
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Entry
PF3D7_0623600 CDS
T00095
Name
(RefSeq) transcription or splicing factor-like protein, putative
KO
K13095
splicing factor 1
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PF3D7_0623600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfa03041
]
PF3D7_0623600
Spliceosome [BR:
pfa03041
]
Complex A
Other components
Complex A specific factors
PF3D7_0623600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC_3
KH_12
Motif
Other DBs
NCBI-GeneID:
3885872
NCBI-ProteinID:
XP_966218
PlasmoDB:
PF3D7_0623600
UniProt:
C6KT72
LinkDB
All DBs
Position
6:join(956765..958481,958626..958756)
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AA seq
615 aa
AA seq
DB search
MYYDPLVALVNILPVEKLSDENSKKKSRWERNATNNIIENKVVVSNKWGSEDYKPYLPLP
FVDFPPGLTPAQLDQFLREQRYDELTKKLNKGELEYVDPDIRPPSPPPIYDKNGSRINTR
EARIKNSMIEEHHRLIEYLLKHVDGFVAPPTYKPIKKIRKIEIPIDKYPEYNFMGLIIGP
RGCNHKRLEAESGAQISIRGKGTLKEGKKTDHQTEIEAAMPKHVHIAADTEECVEKAVSL
ITPLLDPFHPLHEEYKRKGLEQLALVNGINLNQLDTQKCSICNSNTHLTFECPENMNIQN
FKKPEIKCNLCGDHGHITLDCKLAKQSSNYINKNDLENSNNLSQPIHTHVHSPAPPPPPP
PPPLYDPLISTPQGFNGMYKMDTKKMDLEYEKMMNELNSDPNKEKKNDDIYKKLSENTMD
NIGNTNDIMNMNNDKYNISNDSNMIQTNNNNNINDNKELYKNENEYNLNYIETNNNYMNN
YSTNINKYNPSSHHNINNPNFIPLPQNNNENHFNNMLNFNNVNNIPLTPPLPILPNFLNI
PFIDNDLMANPAFAYQAKAPLSLDPIYMQNYASWAQIPMNYAEQLLVNAPAPDTNPPPLP
SDSVCLNKEENTNTT
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtattatgacccgctggttgcacttgtgaatatattacccgtagaaaagttaagcgat
gagaatagtaaaaaaaaatcaaggtgggaaagaaatgcaactaacaatattatagaaaat
aaagtagttgtatcgaacaaatgggggtctgaagattataaaccttatcttccattacct
tttgttgatttcccaccaggtttaactccggcgcaattagatcaatttttgagagaacag
cgatatgatgaattaacaaaaaaattaaataaaggagaattagaatatgtagatccagac
attcgaccgccttctccacctcctatatatgacaagaatggtagtaggataaatacaaga
gaagcacgaataaaaaatagtatgatagaagaacatcataggttaatagaatatttatta
aaacatgtagatggttttgtagcacctcctacatataaaccgataaagaaaattcgtaaa
atagaaatacctatagataaatatccagaatataattttatgggtttaattattggtcct
cgtggttgtaatcataaacgattagaagcagagagtggtgcacaaataagtataagagga
aaaggtacattgaaagaaggtaaaaaaacggatcatcaaactgaaatagaagctgctatg
cctaaacatgtacatatagcagctgatacggaagaatgtgtagaaaaagctgttagttta
ataacacctttattagatccttttcaccctttacatgaagaatataaaagaaaaggtttg
gaacaattagctttggttaatggtattaacctaaaccaattagatacacaaaaatgttct
atatgtaattcaaatacacatttaacctttgaatgtcccgaaaatatgaatatacaaaat
tttaaaaagccagaaattaaatgtaatttatgtggtgatcatggtcatattactttagac
tgtaaactagcgaaacagtcatcaaattatattaataaaaatgatttagagaattccaat
aatttatcacaacctatacatacacatgtacattcacctgcacctcccccacctccacca
cctcctccattatatgatccattaataagcacaccacaaggatttaatggaatgtacaag
atggatacaaagaaaatggatttagagtatgaaaaaatgatgaatgaattaaatagtgat
ccaaataaagaaaaaaaaaatgatgatatatataaaaaattaagcgaaaatacaatggat
aatattggaaatacaaatgatataatgaatatgaataatgataaatataatatatcaaat
gatagtaatatgatacaaacaaataataataataatataaatgataataaggagttatat
aaaaatgagaacgaatataatttaaattatatagaaacaaataataattatatgaataat
tattctactaatataaataaatataatccatcaagtcatcataatataaacaatcctaat
tttataccacttccacaaaataataatgaaaatcattttaataacatgttaaattttaat
aatgtgaataatatacctctaacacctcctttacctatattaccaaattttcttaatata
ccatttattgataatgaccttatggcaaatcctgctttcgcatatcaggccaaagcacca
ttgtctcttgacccaatatacatgcaaaattatgcaagttgggcacaaattcctatgaat
tatgcagagcagttactagtaaatgcgcccgcaccagacacaaatcctcctccactacca
tcggacagtgtatgtttgaataaggaagagaatacaaatacaacataa
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