Plasmodium falciparum 3D7: PF3D7_0706700
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Entry
PF3D7_0706700 CDS
T00095
Name
(RefSeq) DNA mismatch repair protein MSH2, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PF3D7_0706700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfa03400
]
PF3D7_0706700
DNA repair and recombination proteins [BR:
pfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PF3D7_0706700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
Motif
Other DBs
NCBI-GeneID:
9221883
NCBI-ProteinID:
XP_002808765
PlasmoDB:
PF3D7_0706700
UniProt:
Q8IAJ9
C0H4L8
LinkDB
All DBs
Position
7:322907..325528
Genome browser
AA seq
873 aa
AA seq
DB search
MSCTDECEDKSRVISFNLDVRNNIRYVGICIYDIYSNEFSLCEYIENEHFTVLESILLQT
RPSSCLYLSHNEKIDEKRINLILNLCDIKSKELPKIYYESCSIENDLMKLLKGSDIKQCV
HFLTDLQLACKCLCSIVKHLDLLNDNGSINKCILKNYHINKYLKLDKAAMVALNIYDDIH
IDYGSNKNTTKINSSSANTLTLYKFLNKCKTKIGQRKLLNWIIHPIRDEKKINERLDMVE
IFKEESVIRSIIQSDYLRKVCDLQIIIKKFKTTSSYLNDTKDNIKGSNNNDNIYDHNNNN
TMIMKKKNYNIIFKSKHSCNLEDLVKLYDTIVVSKKIYYLLNDYKGTNQDTLNKKILKPL
GECLIKLEPYLKLIELTIDFEEIEKQNNYLISRTFDDDLDLLATQKDNIYNLIKEHRLEV
EEDIQYLKGKEKIKKKATTSKLIGGTINNSNNNYNNNNIKEDIKLVECNINIFLFRAVKK
DINYIQERKNIYIQVRMNKNEILFHTNKLKNLCRQYEHILNQYNIAQESLAHKAIQVACS
YWEPIIILSKIISDIDIFCSFGFICCSSISTYVRPEIEENGHILHMKNSRHPLVESNLLL
INNFIPNDVYMNKDITRLNIITGPNMGGKSTYIRQIALICVMAHIGCFVPCTYAKIPIFT
QIMCRVGSSDIQLKGISTFFSEMIEIAAIIKNADQNSLIIIDELGRGTSTYEGFGISWSV
AHYILNTIKCFCLFATHFHEMSNLEDEYKGVINNHVGAKIDTEKKKISFLYEIKKGYADK
SYGVYVAQIAQLPKSVIHKAFQKSKELESVENRHYFKKKLLTQTNQQNDTNHTSNYNKSI
SYLKEIFNVTHEQEFLTAFKKYKHELKNIFNEI
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgtactgatgaatgtgaagacaaaagccgagttataagtttcaatttagatgtg
agaaacaatattcgatatgtaggtatatgcatatacgacatatatagtaacgaattttct
ttatgcgaatatatagaaaatgaacattttactgttttagaatccattttattacaaacg
agacctagtagttgtctatatttatcacataatgagaaaatagatgaaaaaagaattaat
ttaatattaaatttatgcgatataaaatctaaggagctaccaaaaatatactatgaatcg
tgttcgatagaaaatgatcttatgaaattattaaaaggaagtgacataaaacaatgtgtt
cattttttaacagatctacaattagcttgtaaatgtttatgtagtatagtgaaacattta
gatttattaaatgataacggttctataaataaatgtattttaaaaaattatcatattaat
aaatatcttaagttagacaaagctgctatggttgctctaaatatatatgatgatatacat
atagattatggtagtaacaaaaatacaacgaaaataaattcatcatctgctaacacatta
acactttataaatttctaaacaaatgtaaaacaaaaattggacaacggaaattattaaat
tggataatacacccgataagggatgaaaagaaaataaatgagagattagatatggtagaa
atatttaaagaagaaagtgttattagatctataattcaatcggattatttaagaaaggta
tgtgatttacaaataataataaaaaaatttaaaactactagtagttatcttaatgatact
aaggataatataaagggtagtaataataatgataatatatatgatcataataataataat
actatgataatgaaaaaaaagaattacaatataatcttcaaaagcaaacattcgtgtaat
ttagaagatctggttaaattatatgacaccattgttgtatccaaaaaaatatattaccta
ttaaatgattataaaggtacaaaccaggataccctaaataaaaaaatattgaaaccttta
ggtgagtgtcttataaaactagaaccttatttaaagcttatcgaattaaccatcgatttt
gaagaaatagaaaagcaaaataactatttaatatctaggacatttgatgatgatctggat
ttattagctacacaaaaagataatatatataatttaataaaagaacatagactcgaggta
gaggaggatatacaatatttaaaaggaaaagaaaaaataaaaaaaaaagcaacaacatct
aaattaataggaggaacaataaataattcaaataataattataataataataatattaaa
gaagatataaaattagtcgaatgtaatataaatatatttctatttagagctgtaaaaaaa
gatataaattatatacaagaaagaaaaaatatatatatacaagtaagaatgaataaaaat
gaaatattatttcatacaaacaaattaaaaaatttatgtagacaatacgaacatatatta
aatcaatataatatagcacaagaaagtttagctcataaagcaatacaagtagcatgttca
tattgggaacctataataatattatcaaaaataatatctgatattgatattttttgttcc
tttggatttatatgttgttctagtatatcaacatatgtaagaccagaaattgaagagaat
ggacatatattacatatgaaaaattctcgtcatccattagttgaatcgaatttattatta
ataaataattttatacccaatgatgtttatatgaataaagatattacacgattaaatatt
attacaggcccaaatatgggaggaaaaagtacatacatcagacaaatagctcttatatgt
gttatggcacatataggatgttttgttccttgtacttatgcaaaaatacccatctttaca
caaattatgtgtcgagtcggatcatccgatatacaattaaaaggaatttctacattcttt
tcagaaatgatcgaaatcgcagccattattaaaaacgcagatcaaaattcattaatcatt
atagatgaattaggaagaggtacatcaacatatgaaggttttggtatcagctggtccgtt
gcacattatatcctaaatactataaaatgtttttgcttatttgctacacattttcatgaa
atgtcaaacttagaagatgaatataaaggagtaatcaataatcatgtaggagccaaaatt
gatacagaaaaaaaaaaaatctccttcttatatgaaattaaaaagggttatgctgataaa
agttatggagtatatgttgctcaaatagcacaattaccaaaatctgttattcataaagct
ttccaaaaatcaaaagaattagaatcggttgaaaatagacactattttaaaaaaaaatta
ctaactcaaactaatcaacaaaatgacacaaaccatacatctaattataataaatccata
tcttatttaaaagagatatttaacgtcacacatgaacaagaattcttaacagcattcaaa
aaatataaacatgaactcaaaaatatattcaatgaaatataa
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