Plasmodium falciparum 3D7: PF3D7_0804600
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Entry
PF3D7_0804600 CDS
T00095
Name
(RefSeq) tRNA pseudouridine synthase, putative
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pfa
Plasmodium falciparum 3D7
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfa03016
]
PF3D7_0804600
Enzymes [BR:
pfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PF3D7_0804600
Transfer RNA biogenesis [BR:
pfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PF3D7_0804600
Prokaryotic type
PF3D7_0804600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
2655322
NCBI-ProteinID:
XP_002808812
PlasmoDB:
PF3D7_0804600
UniProt:
C0H4R3
LinkDB
All DBs
Position
8:complement(join(268856..268937,269108..270696))
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AA seq
556 aa
AA seq
DB search
MENGNKKRLNNYEKNKERIKKLKLERQAIKKKEEEGKEKYENEEKNNLNLKKYALCIGYI
GSQYHGCQGQGENCETIENTLERTLLKINAIKKKKFFKNFNFCLSRSARTDQGVHALFNI
FVYNVDINCTNMKNEEVHKTVNNSNDDHKTVNNNNDDHKTVNNNNDDHKTVTNNNNDHKT
VNNNNNDENFCGMMENQKNDQEKNYEELFKERKEKEEKFKNLLNDHLPCDIKCFKIYKVT
KSFDARKFCSFRFYEYLFPVYVLSEVQVNEKYKETFHQAILDIDEYVQRCKEEKRTRRNN
EKNHIDSTNKENENIYFKNGDNIDSMNSTTNNNSKDFSCTKDNTEQPNIVENIKRDIIDE
DIFSIKHFKEDLNEEELNTFFDIFNNYVGYHNFHCFTKKKIDQTTYRFIKYFDVSTVKLF
DYHFLSVKILGQSFLMHQIRKMITLAVETYRKATSINSIYYCLNTKNYIPITLFPSDGLM
LICPYFNAYNEKVCKQPHTLPIYFEETEDIMEFKKNKIGKCIIEKMKQNVWKEWLQRINK
HPFIYHFIKEKINSTI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgggaataagaaacgattgaacaattacgaaaaaaataaagagaggataaag
aaactaaaattagaaagacaagcaatcaagaagaaagaagaagaaggaaaagaaaaatat
gagaatgaagaaaaaaataatttgaacttaaaaaaatatgcattatgtataggatatatt
ggttcacagtatcatggatgtcaagggcaaggtgaaaattgtgaaacaatagaaaataca
ttagaaagaacattattaaaaattaatgctattaaaaaaaaaaaatttttcaaaaatttt
aatttttgtttatcaaggtcggctagaacagatcaaggggttcatgcactttttaatatt
tttgtttataatgttgatataaattgcactaatatgaaaaatgaagaggtccataaaact
gttaataatagtaatgatgaccataaaactgttaataataataatgatgaccataaaact
gttaataataataatgatgaccataaaactgttactaataataataatgaccataaaact
gttaataataataataatgatgaaaacttttgtgggatgatggaaaatcaaaaaaatgac
caggaaaaaaattatgaagagctttttaaagaacgaaaagaaaaagaagaaaaatttaaa
aatttattaaatgatcatttaccatgtgatataaaatgctttaaaatttataaagttacc
aaaagttttgatgcaagaaaattttgttcttttagattttatgaatatttatttcctgtt
tatgttttaagtgaagtacaagtaaatgaaaaatataaagaaacatttcatcaagcaata
ttagatatagatgaatatgttcaaaggtgtaaggaagaaaaaagaacaaggcgaaataat
gaaaaaaatcatattgacagcacaaataaagagaatgaaaacatatattttaaaaatggg
gataatatagatagtatgaattctaccacaaataacaattcaaaggatttttcttgtact
aaggataatacggaacaaccaaatattgtggaaaatataaaaagagatataatagatgaa
gatatattttccataaaacattttaaagaagatttaaacgaagaagaattaaatacattt
tttgatatatttaataattatgtaggatatcataattttcattgttttacaaaaaaaaag
attgatcaaactacttatcgatttataaaatattttgatgtaagtactgtgaaattattt
gattatcattttttatctgtaaaaattttaggccaatcttttttaatgcatcaaattaga
aaaatgattacattagctgttgaaacatatagaaaagctacttctattaattctatatat
tattgcttgaatactaaaaattatatacctatcacattatttccatcagatggattgatg
ttgatatgtccatattttaatgcttataatgaaaaagtgtgcaaacagccacatacccta
cctatatattttgaagaaacagaagatattatggaatttaagaaaaataaaattggaaaa
tgcattatagaaaaaatgaagcaaaatgtgtggaaagaatggttgcaaaggattaataag
cacccttttatttatcattttataaaagaaaaaataaactcaactatataa
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