Plasmodium falciparum 3D7: PF3D7_0821300
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Entry
PF3D7_0821300 CDS
T00095
Name
(RefSeq) ATP-dependent RNA helicase DHX36, putative
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PF3D7_0821300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfa03019
]
PF3D7_0821300
03012 Translation factors [BR:
pfa03012
]
PF3D7_0821300
Enzymes [BR:
pfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PF3D7_0821300
Messenger RNA biogenesis [BR:
pfa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
PF3D7_0821300
Translation factors [BR:
pfa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PF3D7_0821300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
ResIII
AAA_14
nSTAND3
ATPase_2
ABC_tran
AAA_22
NB-ARC
NPHP3_N
RNA_helicase
TsaE
Sigma54_activat
AAA_19
T2SSE
Motif
Other DBs
NCBI-GeneID:
2655493
NCBI-ProteinID:
XP_001349312
PlasmoDB:
PF3D7_0821300
UniProt:
Q8IB47
LinkDB
All DBs
Position
8:complement(join(958531..959559,959712..960005,960460..961740))
Genome browser
AA seq
867 aa
AA seq
DB search
MRELPILKYKHEIKKLIKKNNLIIIKGETGCGKTTQVPQIINEIFFDKKEKKYDNIKHKN
DEKKKRKEKKKMLISLPRRVATITVAERVSKEMKRGDIGNYVGYTIRFKNVCSDKTRIKF
VTDGILIREIMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRKKIKIILMSATF
DINIFNQFFNNPPIITIPHKLHKITIYYPRRNIEDYILSVVSTILQIHFGNTSYSSEFEN
DDDHRENKPNELNELNKSNEQNELNESNEVNKEHDSYESNKTHDINEIDEQNNLQTDNIS
MNNINEDIKKTEDKSLGDILVFLPGQEEIEMVNIMLKEKLKIIYKGNLLNKLMKERNNYN
NQNDFQNKINNKFNTDDHILNEICFHFGKTEIMPDKIYNMKILQLYSSLPNKKQKVIFEP
VPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVNRGSNVLRVTQISKDSAIQR
SGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSDLTQIYLELKAMNINNPLEFNFPEN
PRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLNPIYANILLCSIEFNCIDEIATI
VALLNCDSIFLNYNFYEDLDTLNNDSLDKKKNNNEQKKIVQKNSVEDSKENINKLENYDK
KKGKNNNLEPYDDDHDDNDNDSNNNDDDMGEKKMNDKNKLINVARRKLIHPDGDHLTLLH
IFYLWQEADIKEKKHFCNIYALNNEILQQVEKIKIQLLEIMKNKMKIEIPKKLHMHKWDQ
ILICLCKACFFNIAKSTSNTNVYINLVNKTKIRIHPSSTLFNSYIKPTFIFYSDIVQTKR
LYARIVTKIEADWLLKYVSAKFQVAKS
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattacccatattgaaatacaaacatgaaattaaaaaattgataaaaaaaaat
aatttaatcataataaaaggagaaacaggttgtggaaagactactcaagttccccaaata
ataaatgaaatattttttgataaaaaagagaaaaaatatgataatatcaaacataaaaat
gatgaaaaaaagaaaaggaaagagaaaaaaaaaatgttaatatctcttcctagaagagta
gcaactattactgttgctgaaagagtttccaaagaaatgaaaagaggtgatataggtaat
tatgttggttatactataagatttaaaaatgtatgttctgataaaactcgaataaaattt
gttacagatggtatattaattagagaaatcatgaatgatcctttattaaaaaaatataaa
tttttaattctcgatgaaattcatgaaagatctattagaaccgatgtcttattaggctat
acaaaaattttgttacaaaaaagaaaaaaaattaaaattatactaatgtctgcaacgttt
gatataaacatatttaatcaattctttaacaacccaccaattataactattcctcataag
cttcataaaattacaatatattatcctagaagaaatatagaagattatatcctgtcagtt
gtcagtacaattttgcaaatacattttggtaatacttcatattcatcggaatttgaaaat
gatgatgatcatagagaaaataaaccaaatgaattaaacgaattaaataaatcaaacgaa
caaaatgaattaaacgaatcaaacgaagtgaataaagagcacgactcgtacgaatcaaat
aaaactcacgatataaatgaaatagatgaacagaacaacctgcagacagataatatttct
atgaacaacataaatgaagatataaaaaagacggaggataaaagtcttggtgatatttta
gtattcttacctggtcaagaagaaatcgaaatggtaaatattatgttaaaagaaaaatta
aaaataatttataaaggaaatttattaaataaattaatgaaagaaagaaataattataat
aatcaaaatgattttcaaaataaaataaataataaatttaatactgatgatcatatactt
aatgaaatttgttttcattttggtaaaacggaaataatgccagataaaatttataatatg
aaaatcttacaactatattcatcacttccaaataaaaaacaaaaagttatatttgaacct
gttcccccaaacacaagaaaggtaattttaagtaccaacattgcagaaacatcggtgacc
attccgaatataaaatatgtaatcgacagcggaaaagtgaaaataaaatattttgatgta
aataggggaagcaacgttttaagagtaactcaaatatctaaagattctgcaattcaaaga
agtggaagagcaggaagagaagcgccaggacaggtatatcgaatatatacaaaagaggag
tatgagaatatgaatccttttttaatacctgaaattttccgttcagacttgactcaaata
tatttggaattaaaggccatgaatattaataacccacttgaattcaattttccagaaaat
ccaaggaaagaactttttgtacattcagcgaaaatgctttttaaaataaacgctatcgat
atgaataataatttaactgatttgggaaagaaactttgcttatttcctttaaatcctata
tacgctaatatattattatgttccatagaatttaattgtatagacgaaatagctactatt
gtagcattacttaattgtgacagtatttttttgaattataatttttatgaagatttggat
acgctaaacaatgactccttggacaaaaaaaaaaataataatgaacaaaaaaaaattgtg
caaaagaattctgttgaagattcaaaggaaaatataaacaaattagaaaattatgataaa
aaaaaaggaaaaaataataatcttgaaccatatgacgatgaccatgatgataatgataat
gatagtaataataatgacgatgatatgggagaaaaaaaaatgaatgataagaataaatta
attaatgttgcaagaagaaaacttatacatcccgatggggatcatttaacattattacat
attttttatttatggcaagaagctgatattaaagaaaaaaaacatttttgtaatatatat
gctttaaataatgaaatattacagcaagtagaaaaaataaaaatacaattattagaaatt
atgaaaaataaaatgaaaattgaaataccaaaaaaattacatatgcataaatgggatcaa
attttgatttgcttatgtaaggcatgtttttttaatatagccaaatcaacatcaaataca
aatgtttatataaatttagtgaataagacaaaaataagaattcatccatcatcaactctt
tttaactcttatattaaaccaacatttatattttattcggatattgtacaaacaaaaaga
ttgtatgctcgaattgtgacgaaaattgaggcagattggttattgaaatatgtatcagca
aaatttcaagtagccaaaagttaa
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