Plasmodium falciparum 3D7: PF3D7_1018000
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Entry
PF3D7_1018000 CDS
T00095
Name
(RefSeq) tRNA pseudouridine synthase, putative
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pfa
Plasmodium falciparum 3D7
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfa03016
]
PF3D7_1018000
Enzymes [BR:
pfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PF3D7_1018000
Transfer RNA biogenesis [BR:
pfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PF3D7_1018000
Prokaryotic type
PF3D7_1018000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
FAM32A
Motif
Other DBs
NCBI-GeneID:
810333
NCBI-ProteinID:
XP_001347460
PlasmoDB:
PF3D7_1018000
UniProt:
Q8I715
LinkDB
All DBs
Position
10:718454..720136
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AA seq
560 aa
AA seq
DB search
MVIILLLAIICSYNITSYPCLNYKRRKNFYYCEIFKNEKEENSLKYPIYKYKRIKRNRSN
INAFKKYNLINTLINRNYNVNNNMKKDGFHTRRCVAQLSLFSRKKRKKTNNEKKYIFNHI
HFYSYILVYFNEGLLQHWTTTPHVTKIIFDNMYKGFRMKGGDNINIMGFYNTHNRKIHNY
SLDIHRSDEKDTTDIIKKIKNKTGEKLIKDNNKKKNNNNINSNNNNINSNNNNNNNNNNN
NNINDISIKKDRVCCNNPHINNKGDMDEENNEDHVNKTKEEHSFESVLNKYNKELILSKS
KIVHLDFPICKNNSSNIVTMDDIFYGGFLNIYKPVKLYSMRVCEKIKKILKDYFYKLNKK
KVNIKVGHGGTLDPFAEGVLIIGIQQATKKLSDFLKCYKKYLALSIFGYETDTLDREGKI
IKEEHVIHKKLKKQDILTNLQKFIGHIKQYPPIYSAKRFKGLRLYEYARKNISVQIKPCN
VHIKDIQYYKEIDLPFLDLYIHCSGGTYIRSLIRDFANSMNTSGTLIKLVRTEQNEFNYK
NSLHYDDINLNTIKKYFIKL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggtaataatcctcttacttgctataatctgctcatataatataacatcatatccatgt
ttaaattataaaagaagaaaaaacttttattattgtgaaatatttaaaaatgagaaagag
gagaattcattaaaatatccgatttataaatataaacgtataaaaaggaatcgctctaat
ataaatgcttttaaaaagtataatttaataaatacgttaataaatcgaaattataatgtc
aataataatatgaagaaggatggtttccatacaagaagatgtgtagctcaattaagttta
ttctctagaaagaaaagaaaaaaaacaaacaatgaaaaaaaatatatatttaatcatatt
catttttatagttatattcttgtgtattttaatgagggccttcttcaacattggacgact
acaccacatgttacaaaaattatttttgataatatgtacaaaggttttaggatgaagggg
ggggacaatataaatatcatgggattttataatacacataatagaaaaattcataactat
tctttggatattcacagatctgatgaaaaggatacaacagacataataaaaaaaataaaa
aataaaacaggagaaaaattaataaaagataataataaaaaaaaaaacaataataatatt
aatagtaataataataatattaatagtaataataataataataataataataataataat
aataacatcaatgatatatccataaaaaaagatcgcgtatgttgtaataacccccatata
aataataagggagatatggatgaagaaaataatgaggatcatgtgaataaaaccaaagaa
gaacattcctttgaaagtgttttaaataaatataataaagaattaattttaagtaaaagt
aaaattgtacatttggattttccaatttgtaaaaataattcttcaaatattgtaacaatg
gatgatatattttatggaggttttttaaatatatataaacccgtgaaattatattctatg
agggtttgtgaaaaaatcaaaaaaatattaaaagattatttttataaattaaataaaaaa
aaagttaatataaaagtaggacatggaggaaccttagatccatttgctgaaggcgtttta
ataataggcatacaacaagctacaaaaaaattatcagattttttaaaatgttataaaaag
tatctagctctttccatttttggttatgaaacagatacattagatagagaaggaaaaatt
attaaagaagaacatgttatacacaaaaaattaaaaaaacaggatatactaacaaattta
caaaagttcataggacatataaaacaatatcctcctatatattcagcaaaacgtttcaaa
ggattaagattatatgaatatgcaagaaaaaatatatctgtacaaattaaaccatgtaat
gtacatattaaggatattcaatattataaagaaattgatctcccttttctggatctttat
atacattgttctggaggtacatatataagaagtcttataagagattttgcaaattctatg
aatacaagcggcacattaataaaacttgtacgaacggaacaaaatgaatttaactataaa
aactctcttcactatgatgatataaacctgaatactataaaaaaatatttcatcaagttg
tga
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