Plasmodium falciparum 3D7: PF3D7_1030100
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Entry
PF3D7_1030100 CDS
T00095
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PF3D7_1030100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfa03041
]
PF3D7_1030100
Enzymes [BR:
pfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PF3D7_1030100
Spliceosome [BR:
pfa03041
]
Complex C
Other components
Step II factors
PF3D7_1030100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
AAA_22
DEAD
S1
AAA_19
T2SSE
PhoH
Sigma54_activ_2
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
810451
NCBI-ProteinID:
XP_001347578
PlasmoDB:
PF3D7_1030100
UniProt:
Q8IJA4
LinkDB
All DBs
Position
10:complement(join(1224519..1225958,1226121..1226249,1226680..1226736,1226846..1229092))
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AA seq
1290 aa
AA seq
DB search
MDCLSKINLIRKVNEELYNSIGVEDDNLSEFLIYLCEKSTSLEEFCKDVFENGGVIEQAV
LKYIYNMIKKDNKKKKDHDNEDDVNSKENIFLQNLNYNDNNLEYKKIEMKNEKMKKYHCL
TLKNEDITNLVDSDENDKKEKSIKGTKEKKESIEITSKQKKNSDINVTTRDLSDSSYQKK
RRKKKNSSGGSSKNTESSFETKDIKKDNKYESGKKRKYDERYYDRHSKEHHHSNKHRHSK
EHRHSKEHLHSKEHHHSNKHHHSNDHHHSNDHHHSKDHHHSNKHHHRRHISSSSDSSYYN
NKKKKEKTHRDKKNEEDKSYDDYMALKLNNIFNGTINKITDFGLFVSFKTNEGYKEGLVH
ATDILPNRKRVVNMNEKFKRNMKVKVKVKGIFNQKISLNMSEVDQKTGKNLVNDDMNKEE
DNYISLFDDINEDFNDLKKKNANVFKDDPKETLKYESVIKIQSDYSKWEIQQLIKSGVVF
DENIRNEYKNLKIDEKIEDEEDIIEIEVNEKEPAFLKGQTTKAGAKLSPIQIIVNAEGSL
AKAITTTSALAKERKEQKQNEQNAIYDNIPKDISRPWEDPKPNLGERTIAEALKNIGKNY
DIPEWKKNYNNNNISVGVKNTLPINEQRSKLPIYNLKNDLMKAIEKNNVLIVIGETGSGK
TTQIPQYLHEANYTEKGIVGCTQPRRVAAMSIAKRVSEEFGCILGQEVGYSIRFDDCTSN
DTIIKYLTDGMLLRETLSDTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRADFKLI
VTSATLDAEKFSTYFFNSPIFTIPGKIFPVEILHSKEPESDYVEASLITVLNIHLNEHPG
DILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPGCR
KCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRAGR
TGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLKALGINDFLHFDFMDSPSVET
LIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNFNCTDDVVTIVSMLS
VQNIFYRPQNKALLADKKKNKFIMPQGDLITYLNIYNKWKENSFSNYWCHENFIQSRALK
RAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYVNICKSICSGYFNHVCKRDTQQGYTTLL
TNQQVFIHPSSTLFNKNPLFVVYHELVLTNKEYIRDCTIIQPQWLIQLAPNLFIPADEKK
ISKIKLREKIEPLHNYYEEPNAWRLSRRKG
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggattgtttaagtaaaataaatttaatacgaaaagtaaatgaagaattatataacagt
ataggagtcgaggatgataacctttccgagtttttaatttacttatgtgaaaaatctaca
tccttagaagaattttgtaaggatgtttttgaaaatggaggggtgattgaacaagccgtt
cttaaatatatatataatatgattaaaaaggataataaaaaaaaaaaagatcatgataat
gaagatgatgtaaatagtaaagaaaatatttttttgcagaacttaaattataatgataat
aacttagaatataaaaaaatagaaatgaaaaatgaaaaaatgaaaaaatatcattgccta
actttaaaaaatgaagatataactaatttagtagatagtgatgaaaatgacaaaaaagaa
aaatctataaaaggtacaaaggaaaagaaagaaagtatagaaattacatctaaacaaaaa
aaaaatagtgatataaatgttactacacgtgatcttagtgattcgtcttatcaaaaaaag
agaagaaaaaaaaaaaattcttctggtggtagcagtaaaaatacggaatcgtcatttgaa
acaaaagatataaaaaaagataataaatatgaaagtgggaagaaaagaaaatatgatgaa
aggtattatgatcgtcatagtaaagaacatcatcatagtaataaacatcgccatagtaaa
gaacatcgccatagtaaagaacatctccatagtaaagaacatcatcatagtaataaacat
caccatagtaatgatcatcaccatagtaatgatcatcaccatagtaaagatcatcaccat
agtaataaacatcaccatcgtcgtcatatatcctcttcgtccgactcctcttattacaat
aataagaagaaaaaagaaaaaacacacagagataaaaaaaatgaggaagataaatcctat
gatgattatatggccctgaagcttaataacatattcaacggcactataaacaaaattacc
gactttggattatttgtttcctttaaaactaatgaagggtacaaagaaggacttgtccat
gctacagatatactaccaaatcggaaacgcgtagttaatatgaacgaaaagtttaaaaga
aatatgaaagtaaaagtaaaagtgaaaggaattttcaatcaaaaaataagtttaaatatg
tctgaagtagatcaaaaaacagggaagaatttagtaaatgatgatatgaataaagaagaa
gataattacatttctttatttgatgatataaatgaagattttaatgatttaaaaaagaaa
aatgcaaatgtattcaaagatgatccaaaggaaactttaaaatatgaaagtgttattaaa
atacaaagtgattattctaaatgggaaatacaacaattaataaagagtggagttgtattt
gatgaaaatattagaaatgaatataaaaatcttaaaatagatgaaaaaatagaagatgaa
gaagatattattgaaatagaagtaaacgaaaaagaacctgctttcttaaaaggacaaaca
acaaaagctggtgcaaaattatcacccatacaaattattgtaaatgctgaaggatcatta
gctaaagcaataacgactacatctgcattagcaaaagaaagaaaagaacaaaaacaaaat
gaacaaaatgcaatatatgataatatacctaaagatattagtagaccttgggaagatcca
aaacctaatttaggagaaagaaccatagcagaagctttaaaaaatattggaaaaaattat
gatataccagaatggaaaaaaaattataataataataatatttccgtaggagttaaaaat
acattaccaataaatgaacagagatcaaaattaccaatatataatttaaaaaatgattta
atgaaagctatcgaaaaaaataatgttctcatcgttatcggagaaacaggtagtgggaaa
acaacacaaataccacaatatttacatgaagcaaattatacagaaaaaggtattgttgga
tgtacacaacctagaagagtagcagctatgtctattgctaaaagggtaagtgaagaattc
ggatgtattttaggacaagaagtaggatattctatacgttttgatgattgtacatcgaat
gatacaataataaaatatttaaccgatggtatgttgcttcgagaaaccttaagtgacaca
ttgttaacaaaatattccttcatcatacttgatgaagcccacgaaagaaccatttctaca
gatatccttttctgtcttttaaaggatgttgttaggaaacgagcggattttaaattaatt
gttacttcagccacgctagatgcagaaaaattctcaacgtatttttttaattcgccaatt
tttactattccaggaaaaatctttcctgttgagatattacattccaaagaaccagaaagc
gattatgtcgaggccagtctcattaccgtcctgaatatccacctgaatgaacaccctgga
gacattttagtttttttaacaggtcaagatgaaattaatacagcatgtgaaatattacat
gagcgaatgaagaaattagaaagcatgtctccaccacctttaattatattacctatatat
tcttccttaccgtcagaaatgcagagtgtgattttcgaacctgctcctccaggttgtcga
aaatgcattttggctacaaatatagcagaagctagtttaacaattgatggtatatttttt
gttattgatccagggttttgtaaaattaagaaatatgattcgaagagagatatggattca
ttaattgtagctcctatatctaaagctaatgctaaacaaagagcaggtcgtgctggtaga
acgggtcctgggaaatgttatagattatacacggaagaagcatataaaaatgaaatgtca
gaaatgagtgtaccagaaatacaacgtataaatttaggtagtatagtattattattaaaa
gctttaggtataaatgattttcttcattttgattttatggactctccatcagttgaaaca
ttaatacattcactcgaaaatttatattatttaggagccttggatgataatggatattta
acaaaactaggaaagaagatggcgaactttcctatggaaccaaatttatccaaaatatta
ttaacatctttaaattttaattgtacagatgatgttgtaactattgttagtatgttaagt
gtacaaaatattttctatcgtccacaaaataaagctttattagctgataagaaaaaaaat
aaatttatcatgccacaaggtgatttaatcacatatttaaatatatataataaatggaaa
gaaaatagtttctcaaattattggtgtcatgaaaattttatacaatcaagagcattaaag
agagcacaagatgtacgtaaacaaatgctgtccatatttgaaaaatataattatcaagtt
aaaaaaagtactagtaaaaatgatgccactaaatatgtaaatatatgtaaaagtatatgc
tctggttattttaatcatgtatgtaaaagagatacacaacaaggatatacaacactctta
acaaatcaacaggtctttattcatccatcttcaacactttttaataaaaaccctttattt
gttgtatatcacgaattagtattaactaataaggaatatataagagactgtacgatcata
caaccacagtggctcatacagctcgcaccaaatcttttcataccagctgatgaaaagaaa
atatcaaaaataaagttgcgagaaaaaattgagccacttcacaattattatgaggagcca
aacgcttggcgattatcacgaaggaagggttaa
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