Plasmodium falciparum 3D7: PF3D7_1037600
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Entry
PF3D7_1037600 CDS
T00095
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit, putative
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03022
Basal transcription factors
pfa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PF3D7_1037600
09124 Replication and repair
03420 Nucleotide excision repair
PF3D7_1037600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfa03021
]
PF3D7_1037600
03400 DNA repair and recombination proteins [BR:
pfa03400
]
PF3D7_1037600
Enzymes [BR:
pfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PF3D7_1037600
Transcription machinery [BR:
pfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PF3D7_1037600
DNA repair and recombination proteins [BR:
pfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PF3D7_1037600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
810526
NCBI-ProteinID:
XP_001347653
PlasmoDB:
PF3D7_1037600
UniProt:
Q8IJ31
LinkDB
All DBs
Position
10:join(1491414..1491556,1491734..1492503,1492631..1494378)
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AA seq
886 aa
AA seq
DB search
MMNSLKDSSNYSPNLSHTRGSRKRSDIFNENYYAKNLKRRKLKAAKKLKDSTNGEFTKKV
KKQLKDYYEMRFDKKVINLPFSTDSINIQQRGFHDYSKDMKLKKNHMNKPLWICSDGFIY
LEMFNSCSKQASDFLITIAEPICRPELIHEFQLTIFSLYAAISVGITLDELLINLDKFSK
NVLPNELISNITKSAESFGKVKLVLRENKYYIEATNKSELDYLLNNDTIQNARIYSTDNN
NDKNMISLYNLNNRHRDNNKNDNKNNNDDNNNIDKTTSNLLNEDQKGKDCYVTYEAPVLD
TTQLGFKISESEKQLMMEEKKHANLNANENSTNSAEVYSFEVNCDKIEEVKQEALQTMQR
PLLMEYDFRRDKKNPNLICSLKSHVQIRYYQEKALRKMFSNGRSRSGIIVLPCGVGKTLT
GITAASTIKKSALFLTTSAVAVEQWKKQFEDFTNIHPRHIRILTSDYKLDLWPINEAGVL
ISTYTMLSYSGKRSEQSLRIVNDIRRREWGLLVFDEVQFAPAPSFRRINDIVKSHCKLGL
TATLVREDLLIRDLHWIIGPKLYEANWVELQNKGFLAKALCKEIWCSMPCSFYKYYLKSN
SFIKRRLYTCNPRKLMMCEYLIKYHEQNNDKIIVFSDNIFALLHIAKTLNKPFIYGKLSP
IERIAIINKFKHDSSINTILLSKVGDNAIDIPIANVVIQISFNFASRRQEAQRLGRIIRP
KNKANEKKNINDPDSFFYSLVSKDTIEMCYSDKRQRFLINQGYAYNVLSDNIVDFNKLNL
VYKNKKIQENLLKCILASTDDGNMDEDDDLFEDQSFKKDNTKVNKTNSNILLNKKEDSLK
KIDNTTGGLLKLSSNMDVTFADKKKIPTKKFADKHILFRKFLSQNK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatagtttgaaggattcatctaattatagccccaatttgtctcatacaagaggt
tcaaggaaaagatcagatatttttaatgagaattattatgcaaaaaatttaaaaagacgt
aaattgaaggctgccaagaaattaaaagatagcacaaatggagaatttacaaaaaaggta
aaaaaacaattaaaagattattatgaaatgcgatttgataaaaaggtaataaacttacca
tttagcacagattcgataaatatacaacaaagaggttttcatgattatagtaaagatatg
aaattaaaaaagaatcatatgaataagcccttgtggatatgttcagatggatttatatat
ttagaaatgtttaatagttgtagtaagcaagcatctgattttttaataacaatagctgaa
ccaatatgtagaccagaattaattcatgaatttcaattaacgattttctctttatatgct
gcaatatcagttggtataacacttgatgaattattaattaatttagataaattttctaaa
aatgttttacccaatgaattaatatctaatatcacaaaaagtgctgaatcgtttggaaaa
gtaaaattagtgttaagggaaaataagtattatatagaagcaacaaacaaatcagagtta
gattatttattaaataatgatacaatacaaaatgcaagaatatattctactgataataat
aatgataaaaatatgataagtttgtataatttgaataataggcatagagataataacaaa
aatgataataaaaataataacgatgataataataatatagacaaaactacaagtaattta
ttaaatgaagaccaaaaaggaaaagattgctacgtaacgtatgaggccccagtgttggat
acaacacagttaggatttaaaattagcgaaagtgaaaaacaacttatgatggaagaaaag
aaacatgcgaatttaaatgcaaacgagaattcaacaaattctgcagaagtatattctttt
gaagtaaattgcgataagatagaagaagtaaaacaagaagcattgcaaacaatgcaaaga
cccttattaatggaatatgattttagaagggataagaagaatccaaatttaatatgttct
ttaaagagtcatgttcagataagatattatcaagaaaaggcactgaggaaaatgtttagt
aatggtagaagtcgttcaggtataatagtgttaccttgtggtgtaggtaaaacattaacc
ggtataactgcagcaagtactattaaaaagtctgctttatttttaacaacatcagctgtg
gctgtagaacaatggaagaaacaatttgaagatttcacaaatatccatccgagacatatt
agaatattaacatcagattataaattagatttatggccgattaatgaagcaggtgtatta
atatcaacatatactatgctttcttattcaggaaaaagaagtgagcaaagtttaagaata
gtaaatgatataagaagaagagaatggggtttattagtttttgatgaagtacaatttgct
ccagctccatcatttagacgaataaatgatattgtaaaatcacattgtaaacttggttta
acagctaccttagtaagagaggatttattgattcgagatttacattggattattggtcct
aaattatatgaagctaattgggtagaattacagaataaaggttttttagcaaaggcctta
tgtaaggaaatatggtgtagtatgccatgttcgttttataaatattatttaaaatcaaat
agttttattaaaagaagactatatacatgtaaccctagaaaattaatgatgtgtgaatat
ttaataaaatatcatgaacagaataatgataaaattattgtttttagtgataatatattt
gctttattacatatagctaaaactttaaataaaccatttatatatggtaaactatcaccg
attgaaagaatagcaattattaataaatttaaacatgactcttcaattaataccatatta
ttaagtaaagtaggagataatgctattgatatacccatagcaaatgttgttatacaaatt
tccttcaattttgcttcaagaagacaagaagctcaaagattaggaagaattattcgacca
aaaaataaagctaatgaaaaaaaaaatattaatgatcctgattcctttttttatagttta
gtaagtaaagatacaatcgaaatgtgttattctgataaaagacaaagatttcttattaac
caaggatatgcttataatgtgcttagtgataatattgtcgattttaataaacttaatttg
gtttataaaaataaaaaaattcaagaaaatttgctcaaatgtattttggctagtacggat
gatggaaatatggatgaggatgatgatttatttgaagaccagtcttttaagaaagataat
actaaagttaataagaccaattcaaatattttattaaataaaaaagaggattcattaaaa
aaaatagataatactacaggaggattattaaaattatcatcaaatatggatgtaacattt
gctgataaaaaaaaaatacccacaaaaaagtttgcagataagcatatactttttagaaaa
tttctaagtcaaaataaatga
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