Plasmodium falciparum 3D7: PF3D7_1104000
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Entry
PF3D7_1104000 CDS
T00095
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PF3D7_1104000
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfa01007
]
PF3D7_1104000
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfa03016
]
PF3D7_1104000
Enzymes [BR:
pfa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
PF3D7_1104000
Amino acid related enzymes [BR:
pfa01007
]
Aminoacyl-tRNA synthetase
Class II (U)
PF3D7_1104000
Transfer RNA biogenesis [BR:
pfa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PF3D7_1104000
Prokaryotic type
PF3D7_1104000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
810604
NCBI-ProteinID:
XP_001347727
PlasmoDB:
PF3D7_1104000
UniProt:
Q8IIW2
Structure
PDB
PDBj
LinkDB
All DBs
Position
11:complement(join(175608..175660,175800..175919,176080..177778))
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AA seq
623 aa
AA seq
DB search
MPTISVYEDDLFEKLGEEIIEEKLLDVCFDFGLEVDDIEYKNDKKIYKIEVPANRYDLIC
VEGLCRALKNFMCKFDDIKYDISMNNYDICIKGNQYIKVDGSVDDRRGYVVCCVLKNMNI
NDSVYNNIIEIQEKLHHNLGKKRSVLAIGIHDYDKIKFPLKYKFEKKEKINFIPLNEKTN
LNGMNLIDFYSKNLNLKPYLKIIKDFDKYPIIVDSNEQILSLPPIINCDHTKISLNTKNV
FIECTAIDRNKAQIALNILCSMLSEYCVPKYSIQSFVVIYENQDFSDDQNLKKKETQFLY
PIFENKSLTCNIDYVRKLSGISHITVHEVNNLLKRMMLSCDIMDNNTFKVTIPFYRSDIM
HCCDIIEDIAIAYGYGNIKYEPPQICKKHSLNNCSELFRNVLVECGYTEVMTNALLSRDE
NYNCMLRTHKSYDDPNINLDEYNPLAAPIQIKNSKTSEYEIIRTSLIVNLLKFVSANKHR
ELPLRFFEIGDVSYATYNQTDTNAVNKKYLSIIFSDKFTAGLEELHGVLEAILKEYQLFS
DYKIEEKKKENISIRSDMYYKLIPKEDPSFLNERIVDIVLFPHNLKFGVLGIIHPKVLEN
FSLDIPVSAIEINVETLLNVLMM
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccatatcagtgtatgaagatgatttattcgaaaagcttggggaggaaattata
gaagagaaattattggatgtttgttttgattttggtcttgaggtagatgatattgaatat
aagaatgataagaaaatatataaaatcgaagtaccagctaatagatatgatttaatatgt
gtagaaggattatgtcgtgctttaaaaaatttcatgtgtaaatttgatgatataaaatat
gatatatcaatgaataattatgatatatgtataaaaggaaatcaatatattaaagtagat
ggatctgttgatgatcgaagaggttatgttgtttgttgtgttttaaagaatatgaatata
aatgatagtgtatataataatattatagagatacaagaaaagttacatcataatttagga
aagaagagaagtgtattagctataggtattcatgattatgataaaattaaattcccttta
aaatataaatttgaaaaaaaagaaaaaattaattttataccattaaatgaaaaaacaaat
ttgaatggtatgaatttaatagatttttatagtaaaaatctaaatttaaaaccttattta
aaaattattaaagattttgacaaatatccaataattgtagattccaatgaacaaatatta
tctttaccacctattattaattgtgatcatacaaaaattagtttgaatacaaaaaatgtt
tttattgaatgtacagctattgatagaaataaagctcagatagcattaaatattttatgt
tctatgttatctgaatattgtgttcctaaatattctatacaatcgtttgtggttatttat
gagaatcaagattttagtgatgatcaaaatttaaaaaaaaaagaaactcagtttttatat
cctatatttgaaaataaatcgttaacttgtaatattgattatgttaggaaattgtcagga
atttcacatataaccgttcatgaagttaataatttattaaagagaatgatgttatcatgt
gatattatggataataatacatttaaggttactataccattttatagatcagatattatg
cattgttgtgatataatagaagatatagctatagcatatggatatggaaatattaaatat
gaaccacctcagatatgtaaaaagcattcattaaacaattgttctgaattatttagaaat
gtgttagtagaatgtggatatactgaagttatgacaaatgctttattgtcacgagatgaa
aattataattgtatgcttagaacgcataaatcatatgatgatccaaatataaatcttgac
gaatataatccattagctgctcctattcaaataaagaattccaaaacttctgaatatgaa
ataataagaacatcattaattgtaaatttgttaaaatttgtatctgctaataagcataga
gaattaccattgcgattttttgaaataggagatgtatcttatgcaacatataaccaaaca
gatacgaatgcagtcaataaaaagtatctatccataattttttctgataaatttacagca
ggtttggaggaattgcatggtgtcttggaagctattttaaaagaatatcaattatttagt
gattataaaattgaggaaaaaaaaaaagaaaatatatctatacgatctgatatgtattat
aaattgattccaaaggaggatccttcctttttgaatgaacgtatagttgatattgttttg
tttcctcacaatttgaagtttggtgttttaggtattattcatccgaaggttttggaaaac
ttttccctcgatattcctgtgtctgccatagaaataaatgtggaaactttacttaacgtt
ttaatgatgtaa
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