Plasmodium falciparum 3D7: PF3D7_1124400
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Entry
PF3D7_1124400 CDS
T00095
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1, putative
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PF3D7_1124400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfa03019
]
PF3D7_1124400
Messenger RNA biogenesis [BR:
pfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PF3D7_1124400
mRNA degradation factors
5'-3' decay
Lsm complex
PF3D7_1124400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF3479
Motif
Other DBs
NCBI-GeneID:
810802
NCBI-ProteinID:
XP_001347926
PlasmoDB:
PF3D7_1124400
UniProt:
Q8IIB9
LinkDB
All DBs
Position
11:complement(join(964675..964919,965043..965144,965264..965360))
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AA seq
147 aa
AA seq
DB search
MEHSSMPLWLSSFEEEIDTYIFISSRDNKLYLGILRTYDQHGNVFLTHCVEKIIVPEKNY
FSDVYVGNLIIRGDNIAYFGSVDEEKYCKMFDYTIKNDNDEEHNNMDMIKNKKEYSSSEN
IILVYKPINHILKFIPENNADSSIFEN
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atggagcattcgtctatgcccttatggttaagtagctttgaagaagaaattgacacttac
atttttatttcatcacgtgataataaattatatttaggtatattaagaacttatgatcaa
catgggaatgtttttttaactcactgtgttgaaaaaataatcgttcctgaaaaaaattat
ttttcagacgtatatgtgggaaatttaattattaggggagataatattgcctattttgga
tctgtagatgaagaaaaatattgtaaaatgtttgactatactataaaaaatgataatgat
gaggaacataataatatggatatgataaaaaataaaaaagaatattctagtagcgaaaat
attattctggtatataaaccaattaatcatatattaaaattcataccagaaaataatgct
gattcttctatattcgaaaattaa
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