Plasmodium falciparum 3D7: PF3D7_1307600
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Entry
PF3D7_1307600 CDS
T00095
Name
(RefSeq) DNA-directed RNA polymerase subunit alpha, putative
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PF3D7_1307600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfa03021
]
PF3D7_1307600
03400 DNA repair and recombination proteins [BR:
pfa03400
]
PF3D7_1307600
Enzymes [BR:
pfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PF3D7_1307600
Transcription machinery [BR:
pfa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PF3D7_1307600
DNA repair and recombination proteins [BR:
pfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PF3D7_1307600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
814019
NCBI-ProteinID:
XP_001349803
PlasmoDB:
PF3D7_1307600
UniProt:
Q8IEN9
LinkDB
All DBs
Position
13:complement(join(339927..341677,341780..341888))
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AA seq
619 aa
AA seq
DB search
MSLLFLLLFFLTECNIYWSFCVILKTKNPAFLPIQIKNPERHKPNNLKRFYINQNEGVKN
RKYNNRDIYKFEGIDEENKDGKENIDEDYLKEYEEAYHKYDDMDDDERKRRGSENKMNWF
EIRKGEKEREHRYNVYDNEIIKKDLKEIDLERVDKMNRSIGELPPYIYEGGKVYEGMPMD
YKPEIYDFHKYNKYFDDLCKEKKSLIDSYQLDKKLLDDTYYDAKRGGPKTFGFRFKQIQP
VKYHEGRAYTYFFMHSHDVELSPIFLNAFRRVAIKHLKGGRVTALRIPNMKHEFYCIVGV
RENFFDLAQNLRQITFKNVPEDVDMDNYMIGKFRIKGPMIVVAGHMQLPKNVEIVNRNQY
ICSVAAGSYLSMDVKIESIEEYVMPEYGSQSRNRDICKDNFIHFSSSCTPVEHFVFTGQR
RGINLDTLGEINIVEMHTDGSITPKSALLKTIDYISENFQYIENALYNNCHICDDGSLDE
EFRNPEFYMDKDRYTDVPWNKYKTTSEELEETKNWLYRKDVHRQYNIDPESEQSKEERNL
MWEKSKKMREEIQKRKEQIKKGPSASEGEMVPDEERHDCLLDWPVDKSERNMNPPRWVIE
RPLEKNPHVGHEEIYDEGI
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtcattattattcctattactattctttttaacagagtgcaatatttattggtctttt
tgtgtaattttaaaaactaaaaacccggctttcttgcccatacaaattaagaaccctgag
agacataaacccaataatctcaaacgattttatatcaaccaaaatgagggtgtgaaaaat
agaaaatataacaacagagatatttataaatttgagggaattgatgaagaaaataaagat
gggaaagaaaatattgacgaagattatttgaaagaatatgaagaagcatatcataaatat
gatgatatggatgatgatgaaaggaaaagaagaggatccgaaaataaaatgaattggttt
gaaataagaaaaggagaaaaggaaagggaacatcgatataatgtttatgataatgaaata
attaaaaaggatttaaaagaaatagatttagaaagagtagataaaatgaataggtcaata
ggtgaattacctccatatatttatgagggtggaaaggtatatgaaggtatgcctatggat
tataaacctgagatatatgattttcataaatataataaatattttgatgatttatgtaaa
gaaaagaaatcattaattgattcttatcaattagataaaaaattattagatgatacatat
tatgatgcaaaaagaggaggtcctaaaacttttggttttcgatttaaacaaatacagcca
gtaaaatatcatgaaggtagagcatatacatatttttttatgcattctcatgatgtagaa
ttatcacctatatttttaaatgcatttagaagagttgctataaaacatttaaagggagga
agagtaactgctttacgaatacctaatatgaaacatgaattttattgtatagttggggta
agagaaaatttttttgatctagctcagaatttaagacaaataacttttaaaaatgtacca
gaggatgtcgatatggataattatatgatagggaaatttcgaattaaaggtccaatgata
gtagtagcaggtcatatgcaattacctaagaatgtagaaattgtaaatagaaatcaatat
atatgttcagttgctgctggtagttatttgtccatggatgtaaaaatagaaagtattgaa
gaatacgttatgccagaatatgggtcacaatctagaaatcgagatatatgtaaagataat
tttattcatttttctagtagttgtacacctgttgaacattttgtatttactggtcaaaga
agaggtattaatttagatacgcttggagaaattaatattgtagaaatgcatacagatggt
tcaattacacctaaatcagcacttttaaaaactattgattatatatctgaaaattttcaa
tatattgaaaatgcgctttataataactgtcatatatgtgacgatggttctttggacgaa
gaatttcgtaaccctgaattttatatggataaagatagatatactgatgtaccatggaat
aaatataaaacaacgtcagaagagttagaagaaaccaaaaattggttatatagaaaagat
gtacacagacaatataatatcgacccagaaagtgaacaatcaaaagaagaaagaaatctt
atgtgggaaaaaagtaaaaaaatgcgagaagaaattcaaaaaagaaaggaacaaattaaa
aaaggaccatctgcatctgaaggagaaatggtacctgatgaagaaagacacgactgcttg
cttgattggcctgttgataagtctgaaagaaatatgaatccccctagatgggtaattgaa
agacctttggaaaaaaatccacacgtaggtcatgaagaaatatacgatgaaggaatatga
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