Plasmodium falciparum 3D7: PF3D7_1309300
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Entry
PF3D7_1309300 CDS
T00095
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP3, putative
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PF3D7_1309300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfa03041
]
PF3D7_1309300
Spliceosome [BR:
pfa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
PF3D7_1309300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Ysc84
DUF1177
Motif
Other DBs
NCBI-GeneID:
813934
NCBI-ProteinID:
XP_001349821
PlasmoDB:
PF3D7_1309300
UniProt:
Q8IEM1
LinkDB
All DBs
Position
13:complement(427457..429643)
Genome browser
AA seq
728 aa
AA seq
DB search
MDDVKKRRRSRWGEVENKEENKEENKEENKEENKEENKEGDINKDSNNIDILLNKSSEVP
INKNNNIMNMPLSSSLSYNNLNNPLLSSNIHLNILKATEAARLAIEKVKRASRFKENNNI
NKNVRRLEFTPKPLMFDDQGREVDAEGNVINIKPVTFSTLKVNMNKIEEDNMVKKKNDII
ISSDTNIGNTNNNINNDNALWFDARIQNVSKRKETKKKAFFNFITPGSLIKQACNKHYNN
KTLMNFDLKKIIEEKKRVQSFQELSLNFLNNNINENINPNMINIGKKEEVESKMETWDNN
ERYDILEKWDHVLFNLIEPTDVEKENSVDLINEFIQRQKERWETKYFIDNELNNIDNNTN
IVNNNLSSHILCHEEHIKLNQVLKKVDVLLLLKANKKKRRKYKNNIYSLIVNNRLYSINL
NCIKSYIEHPVPLNEDENYDDDKYLIHMFLTPQERKKLRKRKRQEKEREKQDKIRIGLMP
PPPPKMKLSNLMRVMGDTALAQPSKTEYAVRKQMKERELRHFEDNQKRKLKPEERSKKKI
NKWKSNSDEENDVLLIYITNLSNKKHIFKIDINAQQLHLTGVCFMTVLYNFIIVEGKHVS
IERYKRLIFRRIKWNEDVYDDEENQDNHIINTNVQNEEHAQDLYTVNNNINMNNDNNNNN
NNNNNNITYNQQSQCSLIWNGVVKKKNFKNWKMIVAKTEMEVTDYLSQHDALHYYHIIKK
HRSVLEHI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgttaagaaaagaaggcgttcgaggtggggggaggtggaaaataaagaagaa
aataaagaagaaaataaagaagaaaataaagaagaaaataaagaagaaaataaagaagga
gatataaataaagatagtaataatatagatatcttattaaataaaagtagtgaggttcca
ataaataagaataataatattatgaatatgccattatcatcatcgctttcatataataat
ttaaataatcctttattatcttctaatatacatttgaatattttaaaagctacggaagca
gctagattagctatagaaaaggtaaagagagctagtcgatttaaagaaaataataatata
aataagaatgtaagaagacttgaatttactcctaaacctttaatgtttgatgatcaaggt
agagaagtggatgccgaaggtaatgttataaatattaaacctgtaacattttcaacatta
aaagtaaatatgaataaaatagaggaagataatatggtcaaaaaaaaaaatgatataata
ataagtagtgatacaaatattggtaatacaaataataatataaataacgataatgcttta
tggttcgatgcaagaatacaaaatgtgtctaaaagaaaagaaacaaaaaaaaaagcattt
ttcaattttataactccagggtctcttattaaacaagcatgtaataaacattataataat
aaaacattaatgaattttgatttaaaaaaaattatagaagaaaaaaaaagagtacaatct
tttcaagagctgtctctaaactttttaaataataatataaatgaaaatataaaccctaat
atgattaacataggtaagaaagaagaggtagaatctaaaatggaaacatgggataataac
gaaagatatgatatattagaaaaatgggatcatgtgttatttaatttgatagaacctacc
gatgtagagaaagaaaacagtgtagatttaataaatgaatttattcaaagacaaaaagaa
agatgggaaacaaaatattttatagataatgaattaaacaatattgataataatacaaat
attgtaaataataatttaagtagtcatatattatgtcatgaggaacatataaaattaaat
caagttttaaaaaaagttgatgtattattattattaaaagctaataaaaaaaaaaggagg
aaatataaaaataatatatatagtcttatagttaataatcgtttgtattccatcaattta
aattgtattaaatcttatattgaacatccagtgcctttgaatgaagacgaaaattatgat
gatgataaatatttgatacatatgtttttaacaccacaggaaagaaaaaaattaagaaaa
agaaaaagacaagaaaaagaaagagagaagcaagataaaataagaataggattaatgcct
cctccacctcctaagatgaaattatcaaacttaatgagagttatgggagatactgcatta
gctcaaccatctaaaacagaatatgctgtcagaaaacaaatgaaagaaagagaattaaga
cattttgaagataatcaaaaaagaaaactcaaaccagaagaaagaagtaaaaaaaaaatt
aataaatggaaatcaaattctgatgaagaaaatgatgttctcttaatatatattacaaat
ttatctaataaaaaacatatttttaaaatcgatataaatgcacaacaattacatttaaca
ggtgtatgcttcatgactgtattatataattttataattgttgaaggaaaacatgtttcg
atagaaagatataaaagattgatttttagaagaatcaaatggaatgaagatgtatacgat
gatgaagaaaatcaagataatcatataataaatacaaatgtacaaaatgaagaacatgca
caagacttatatactgttaataataacattaacatgaacaatgataataataataataat
aataataataataataatattacatataatcaacagtcacaatgtagtttaatatggaat
ggtgttgtaaaaaaaaaaaattttaagaattggaaaatgattgttgcgaaaacagaaatg
gaagtaacagattatctgagccaacatgacgctttacattattatcatatcataaaaaaa
caccgatccgttcttgagcatatttaa
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