KEGG   Plasmodium falciparum 3D7: PF3D7_1343900
Entry
PF3D7_1343900     CDS       T00095                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4, putative
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pfa  Plasmodium falciparum 3D7
Pathway
pfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PF3D7_1343900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pfa03041]
    PF3D7_1343900
Spliceosome [BR:pfa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    PF3D7_1343900
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_RFWD3 Beta-prop_RIG_2nd PRP4 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_SCAP NBCH_WD40 WD_LRWD1 RMC1_N WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_DCAF4 Band_7 Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 9221985
NCBI-ProteinID: XP_002809064
PlasmoDB: PF3D7_1343900
UniProt: C0H5G7
LinkDB
Position
13:1756212..1758158
AA seq 648 aa
MKIGDVLHDYKLYDNTKKKSSEMVINENDNKERLLEEFEIRSKVRKVCLGIPTQDIDVKN
ILRLLKEPICLFGEDSYDKRKRLKNILITKYDRLIIKKKIEEEDDVEEFKNILKRYYIDF
SDLYPSGLSEANKINEVHDKHKLKDVHDTKEEQNVHMKTVREEDKDILKEKCYTEGTKDL
KKSRIEITIKTLPRIFLYKEMINKFQNGYSKKEYENYITSFNEHIKKESDLYVSQLGDDR
PLTMGKFSPDNSVFAISSFNSYINIFNYRNDDYNLIKTLKNGHEEKINCIEWNYPNNYSY
YSTMNYKDLSKHDLLLASCSSDKSFCIWKPFYDEYDDTNDNINDNINEYINENINENINE
NINENINDNISDNTSDTISDNINDNINDNISDSISDNISDNKNNNSHKVDKYNSNKNKLS
AQNKNYLLCKVNAHDDRINKICFHPLNKYVLTCSDDETIKMFDIETQQELFYQEGHNTTV
YSIAFNPYGNLYISGDSKGGLMLWDIRTGKNVEQIKMAHNNSIMNINFNPFLANMFCTCS
TDNTIKIFDLRKFQISCNILAHNKIVTDALFEPTYGRYIVSSSFDTFIKIWDSVNFYCTK
ILCNNNNKVRNVDIAPDGSFISSTSFDRTWKLYKNKEYTQDNILSHFM
NT seq 1947 nt   +upstreamnt  +downstreamnt
atgaaaatcggtgatgttcttcatgattataaattgtatgataatacaaaaaagaaaagt
agtgaaatggttattaatgaaaatgataataaagaaaggttattggaagaattcgaaata
agaagtaaggtaaggaaagtgtgtttaggtatacctactcaagatattgatgtaaagaat
attttgagattattaaaggaacctatatgtttatttggagaagatagttatgataaaagg
aaacgattaaaaaatatattaataacaaaatatgatagactaataattaagaaaaaaata
gaagaggaagatgatgttgaagaattcaaaaatatattaaaaaggtattatatagatttt
agtgatttatatccatcaggtttatccgaagctaataaaataaatgaagttcatgataaa
cacaaattaaaagatgtacatgacacaaaagaagaacaaaatgtacatatgaaaacggtg
agagaagaagataaagatattttaaaagagaaatgttatacagaaggtactaaagattta
aaaaaaagtagaatagaaataacaataaaaacattaccaagaatatttttatataaagaa
atgataaataaatttcaaaatggatattcaaaaaaagagtacgaaaattatattacttca
tttaatgaacatataaaaaaagaatcagatttatatgtatcacaattaggtgatgataga
cctctgaccatgggtaaattttctccagataatagtgtatttgctattagtagttttaat
tcatatattaatatttttaattatagaaatgatgattataatttaataaaaacattaaaa
aatggtcatgaagaaaaaattaattgtatagaatggaattatcctaataattactcatat
tatagtacaatgaattataaggatttatcaaaacatgatttattattagcttcatgttca
tctgataaatcgttttgtatatggaaaccattttatgatgaatatgatgatacaaatgac
aatataaatgacaatataaatgaatatataaatgaaaatataaatgaaaatataaatgaa
aatataaatgaaaatataaatgacaatataagtgacaatacaagtgacactataagtgac
aatattaatgacaatattaatgacaatataagtgacagtataagtgacaatataagtgac
aataaaaataataattcgcataaggttgataaatataactcaaataaaaataaactatct
gcacaaaataaaaattatttattatgcaaagtaaatgctcatgatgatcgaataaataaa
atatgttttcaccccttaaataaatatgtattaacatgttcagatgatgaaaccataaaa
atgttcgatatagaaacacaacaagaattattttatcaagaaggtcataatactacagta
tatagtattgcttttaatccttatggtaatttatacatatcaggagattctaaaggaggt
ttaatgttatgggatattagaactggtaaaaatgttgaacaaataaaaatggcacataat
aattctataatgaatataaattttaatccatttctagcaaatatgttttgtacttgttca
actgataatactattaaaatatttgatttaagaaaattccaaatttcttgtaatatttta
gcacataataaaattgttacggatgctctttttgaaccaacctatggaagatatattgtt
tcaagttcatttgatacttttattaaaatatgggattctgttaatttttattgtaccaaa
atattatgtaataataataataaagtacgtaatgttgatatagctcctgacggttccttt
atttcttctacatcatttgatagaacgtggaagttgtataaaaataaagaatacacacag
gataatattctttcccattttatgtga

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