Plasmodium falciparum 3D7: PF3D7_1350200
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Entry
PF3D7_1350200 CDS
T00095
Name
(RefSeq) small nuclear ribonucleoprotein E, putative
KO
K11097
small nuclear ribonucleoprotein E
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PF3D7_1350200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfa03019
]
PF3D7_1350200
03041 Spliceosome [BR:
pfa03041
]
PF3D7_1350200
03032 DNA replication proteins [BR:
pfa03032
]
PF3D7_1350200
Messenger RNA biogenesis [BR:
pfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
PF3D7_1350200
Spliceosome [BR:
pfa03041
]
Complex A
U1 snRNP components
Sm proteins
PF3D7_1350200
U2 snRNP components
PF3D7_1350200
Complex B
U1 snRNP components
PF3D7_1350200
U4/U6.U5 tri-snRNP components
PF3D7_1350200
Complex C
U2 snRNP components
PF3D7_1350200
DNA replication proteins [BR:
pfa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
PF3D7_1350200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
APD1-4_N
Hfq
Motif
Other DBs
NCBI-GeneID:
813814
NCBI-ProteinID:
XP_001350215
PlasmoDB:
PF3D7_1350200
UniProt:
Q8IDJ7
LinkDB
All DBs
Position
13:complement(join(2009477..2009495,2009655..2009779,2009878..2009967,2010234..2010281))
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AA seq
93 aa
AA seq
DB search
MATTNKKLQKIMTQPINQIFRFFTNKTVVQIWLYDKPDMRIEGIILGFDEYMNMVLDQTK
EISVKKNTKKELGKILLKGDTITLIMEVKNEET
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctacgacaaataaaaagttacaaaaaattatgacccaacctataaaccaaatattt
aggttttttacgaacaaaacggttgtacaaatatggttatatgataaacctgatatgaga
atagaaggtattatattgggatttgatgaatatatgaatatggtattagatcaaacaaaa
gaaatatccgtaaaaaaaaatacaaaaaaggaacttggaaaaatattattaaagggggat
acaataactttaataatggaagtgaaaaatgaagaaacataa
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integrated database retrieval system
