Plasmodium falciparum 3D7: PF3D7_1364500
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Entry
PF3D7_1364500 CDS
T00095
Name
(RefSeq) exosome complex component RRP45, putative
KO
K03678
exosome complex component RRP45
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PF3D7_1364500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfa03019
]
PF3D7_1364500
Messenger RNA biogenesis [BR:
pfa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PF3D7_1364500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
814299
NCBI-ProteinID:
XP_001350356
PlasmoDB:
PF3D7_1364500
UniProt:
Q8ID62
LinkDB
All DBs
Position
13:2596389..2597822
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AA seq
477 aa
AA seq
DB search
MIICNNNVNHFWKNIKKNIRLDGRTFEDSRNVCINFLKDYGHVEISIGFTKVICKITSEI
VKPHDRKLKEGILKINLDIDNFIEDNENSDNMSDECLEIKNIIDRVLKTSNIINFESLCI
IPGKKVWCICINIMVIENDGNLTDACYLSAYCGLVHFKNHQVRVIKNGDIIIDKEEINYS
PLSILNSPIVTTFAYYEEHDVCLIDPCLHEEEFMSSKISIALNKNGNLISLLKPGGIPLA
CSHIMESIEIAKKRILTILKILEDTLEEDKNIRSYLTKRNLHVKYSSAPVTIRYDNSFKL
KPDISLERYTKNTLIFEDTIKKIEQYIQYNQVQECLNNMNVKLEENDQEEIETCTLKGEG
NLNNPNFIDPMRNTNLLNPTDITIIKRQEFVDNHYDANNNKYNTQANKTFKKELIDFSNL
LTQNHKKSNNLSNNQKDISEQHDNSQESSDDASTIRSDESSDIDFSVAINQNIKKKK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatcatctgtaacaataatgttaatcatttttggaaaaatataaaaaagaatataaga
ttagatggtcgtacttttgaagattctagaaatgtttgtataaattttttaaaggattat
ggacatgtagagatatcaattggttttacaaaagttatttgtaaaataacaagtgaaatt
gtaaaaccccatgataggaaattaaaagaagggatattaaaaataaatttagatatagat
aattttattgaagataatgagaatagtgataatatgagtgatgaatgtttagaaataaaa
aatattatagatagagtattaaaaacaagtaatattataaattttgaatcattatgtatt
attccaggtaaaaaagtatggtgtatatgtataaatattatggtaatagaaaatgatggg
aatttaacggatgcttgttatttatcagcttattgtggtttagtacattttaaaaatcat
caagttagagtaataaaaaatggagatattataatcgacaaagaagagataaactattct
cctttatcaatactaaattctccaatcgtaactacctttgcttattatgaagaacatgac
gtttgtttaattgatccttgtttacatgaagaagaatttatgtcttctaaaatctctata
gcattaaataagaacggtaatttaataagtttattaaaaccgggtggaataccattagct
tgttcacatattatggaatctatagaaatagccaaaaaaagaatacttactatactgaaa
atattagaagatactttagaagaagacaaaaatataaggagttatctaacaaaaagaaat
ctgcatgttaaatattcatcagctcctgtaaccattagatatgataattcttttaaactt
aaaccagatatctcattagaaaggtatacaaaaaatactctaatttttgaagatactata
aaaaaaattgaacaatacatacaatataatcaagtccaggaatgtttaaataatatgaat
gtgaaacttgaagaaaatgatcaggaggaaatagaaacatgtactttaaaaggagaaggt
aatctaaataatccgaattttattgatcctatgagaaatactaatttattaaatcctaca
gatataacaataataaaaagacaagaatttgtggataaccattatgatgcaaataataat
aagtataacacacaagcaaataaaacattcaaaaaagaacttattgatttttcaaattta
cttacacaaaatcataagaaaagtaataatttatctaataatcaaaaagatatttctgag
cagcatgataactcacaagagtcaagtgatgatgcatcaaccataagaagtgacgaatct
tcagatattgatttttccgttgcaattaatcaaaatataaaaaagaaaaaataa
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