KEGG   Plasmodium falciparum 3D7: PF3D7_1448000
Entry
PF3D7_1448000     CDS       T00095                                 
Name
(RefSeq) U3 small nucleolar RNA-associated protein 12, putative
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
pfa  Plasmodium falciparum 3D7
Pathway
pfa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pfa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PF3D7_1448000
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfa03009]
    PF3D7_1448000
Ribosome biogenesis [BR:pfa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PF3D7_1448000
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR3_2nd Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_DCAF4 PAC11 Beta-prop_NWD2_C Beta-prop_WDR41 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WDR54 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_NOL10_N WDR90_beta-prop_4th Utp12 NBCH_WD40 Beta-prop_IP5PC_F Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 812038
NCBI-ProteinID: XP_001348630
PlasmoDB: PF3D7_1448000
UniProt: Q8IKZ5
LinkDB
Position
14:complement(join(1960033..1963757,1963860..1963962))
AA seq 1275 aa
MVKSYDRYEYEDCLGIVNSKSSNCVFLNNNNIISGHDECVGIWNINEKEIKKKLSVPFLP
PYYFFTYHVTYICLNDVNKNIVAVGYTNGSIRLFDMEKNKILSTFSGHTSGICKLKFNEN
GNYLCSCSKDTNIILWDIINDKGVFKLEGHTNVVTDIEFLQRKNDYLDDFLDNNILISVS
KDCLIKVWELNIQTCVQTIVDCEEEITSLIINQTNTRLIVACNSFLKIYKINLYSNHIIK
DTYNTNSKIYITFLANIKRPTNCRIQNMKMIFFIDNEDIYNYPFELEDEKSDNLLYSNPN
NQKVNNLFISSSNGDNIKQNEEILTTDHLSNPNLLLTNNNNLNTSIKYCERARYSVDGDN
SGLLICCTNLKKIEFYKINSIKNQKKSEKNKKKRYIEKLKKKKIKILNEKKKIEKFKGKE
SIDYNFLNQKLEDLEKELFIYNNYDIHTANDEIKYLFNYNYKFKLQNIDVMKKKKKDNYI
YLLVSFMSNRLSVYQVNLYDILHNKDNFVVMDNENKEEREDKDNMDRESDMKDHKSGNNI
DSDIESGSDNDSDNKSDSNIDSDNESGNNIDSNIDSDNKSGSNIDSGEDDETHNKKKVKI
VQKKIYDYSKCFKEISEINKGHNSSVDFLNLSSNNELLVSICKKYVKIWNMNNLQNIITI
NLEGCTNAIFCNNDESLIISDECGYLYLYELKNIELKYTYKAHANKIINLSKKCNQKNNN
NNYNNDNYYYDHNDSSRNNDKGFLSVGEENYLKIFEYTMGVVTNESSDSEKDDNNNNNNN
NNDNTYYNNNNEREKKSFIHNKRSNYKKNSSRDELNNDTYNKYYDDSNDVRKIENCEIFM
FKEIDCYHLSDKVSCAMYSPDGKYICIGYLNNLIEILYSDTLKLHLTLYGHSLPITCMDI
SKDNKILASSGADKFIFLWNMEYGNVNKRIHTECDVVNKIQFFNKNNNLISISRDGYIKM
WDAIKFQCICTVDGNFGILKCLVINHNDDFFLTSGTHKSIRIWKKGEDLIFLEEERDKEL
NLQIEKEAIRNDLAYPSSVEKNVLLNKATIKTIETIKSSEKLIEYLDIIEEEIILLDTYY
KNLTAYEEAKGKNELPDFVQPPTKPLGRPELLNKDPHEFIIEIMCNIKNNILNEVLISLP
FSYAYKLLDYIKTYLISFHFFQKIQDNYKKYLSCGNFNFYVEYSINIVLTIINIYRNQFL
FDNKFRFLLYELQQLILPHLKKSVDQCAFNQTTLNFLMYSMDDDELNLDHILQNNSFINK
ETKKIDQQQGHAKGQ
NT seq 3828 nt   +upstreamnt  +downstreamnt
atggtgaaatcgtatgatagatatgaatatgaagactgcttaggaatagtaaattcgaaa
tcatcaaattgtgtttttcttaataataacaatataatatcaggacatgacgaatgtgtt
ggtatttggaatataaatgagaaggaaataaaaaagaaacttagtgtgccttttcttccg
ccgtattatttttttacctatcatgtaacatatatatgtcttaatgatgtgaacaagaat
attgtagccgttggatatactaatggttccataagattatttgatatggaaaaaaataaa
atattatctacatttagtggtcatacctctggtatctgtaaattaaaatttaacgaaaat
ggtaattatttatgttcttgtagtaaagatacgaatattatattatgggatattataaat
gataaaggtgtttttaaacttgagggacataccaatgttgttaccgatatcgaattttta
caaagaaaaaatgattatttagatgattttcttgataataatattctaattagtgtatca
aaagattgcttaattaaagtatgggaattaaatatacaaacatgtgtacaaactattgta
gattgtgaagaagaaattacaagtttgataattaaccaaacaaatacgagattaatagtt
gcttgtaactcgtttttaaaaatatataaaattaatttatattctaatcatatcattaaa
gatacatataataccaactctaagatttatattacttttttagcaaatattaaaagacca
acaaattgtagaatacaaaacatgaagatgatattttttatagataatgaagatatatat
aattatccatttgaactagaagatgaaaaaagtgacaatttattatattcaaatcctaat
aatcaaaaggttaataatttatttatatcatcttcaaatggtgataatataaaacaaaac
gaagagatattaacaactgatcatttgtctaatccaaatttattattaactaataataac
aacctaaatacttctattaaatattgtgaaagagctagatattctgttgatggagataat
agtggtcttttaatatgttgcacaaatttaaaaaaaatcgaattttataaaattaattct
ataaaaaatcaaaagaaatcggaaaaaaacaaaaagaaaagatatattgaaaaattgaaa
aaaaaaaaaataaaaatattaaatgaaaaaaagaaaattgaaaaatttaaaggaaaagaa
agcatcgattataatttcctgaaccaaaaattagaagatttggaaaaagaattattcatt
tataataattatgatatacatacagcaaatgatgaaatcaaatatttatttaattacaat
tataaatttaaattacaaaatatagatgttatgaaaaagaaaaaaaaagataattatata
tatctccttgtttcgtttatgtctaatcgtttgagtgtatatcaggttaatttatatgac
attttgcataataaggataattttgttgtaatggataatgagaataaggaggagagggaa
gataaggataacatggatagagaaagtgatatgaaggaccataaaagtggtaataatatt
gatagtgatattgaaagtggtagtgataatgatagtgataacaaaagtgatagtaatatt
gatagtgataatgaaagtggtaataatattgatagtaatattgatagtgataacaaaagt
ggtagtaatattgatagtggggaagatgatgaaacacataataagaaaaaggttaaaatt
gtgcagaaaaagatttatgattattcaaaatgttttaaagaaataagcgaaataaacaaa
ggtcacaatagttctgtcgattttttaaacttatcatcaaataacgaattattagtttct
atatgtaagaaatatgtaaagatatggaatatgaataatttacaaaatattataactata
aatctagaaggatgtactaatgctatattttgtaataatgatgagagtctaattattagt
gatgaatgtggttacttatatttatatgaattaaaaaatatcgagttaaaatatacttat
aaagcccatgccaataaaattatcaacctttcgaaaaaatgtaatcaaaaaaacaataat
aacaattataataatgataattattattatgatcataatgatagtagtaggaataatgat
aaagggtttttatctgttggagaagaaaattatttgaagatttttgaatataccatgggg
gttgtaactaatgaatcaagtgatagtgaaaaggatgataataataataataataataat
aataatgataatacttattataataataataatgaaagagagaaaaaatcttttattcat
aataaaagaagtaattataaaaaaaattcgtcaagggacgaactaaacaatgatacatac
aataaatattatgatgatagtaatgatgtaagaaaaatagaaaattgtgaaatatttatg
ttcaaagaaattgattgttatcatttaagtgataaggttagttgtgctatgtattcacct
gacgggaaatatatatgtattggttatctaaataatttaatagaaatattatatagtgat
actttaaagttacatttgaccttatatggtcatagtttacctataacatgtatggatata
tccaaagataataaaatattagcatcgagcggtgctgacaaatttatatttttatggaat
atggaatatggtaatgtaaataaaagaatacataccgaatgtgatgtagtaaacaaaatc
caattttttaataaaaataataatttaataagtatatcaagagatggttatataaaaatg
tgggatgctataaaatttcaatgtatatgtacagttgatggaaattttggtattttgaaa
tgtttagttattaatcataatgatgatttctttttaacttctggtacacataaaagtata
agaatatggaaaaaaggagaagatttaatatttttagaagaagaaagagataaagaatta
aatttacaaatagaaaaagaagctattagaaatgatctagcttacccatcttctgtagaa
aaaaatgttcttttaaataaggctactataaaaaccatagaaacaataaaatcatcagaa
aagttaattgaatatctagatattatagaagaagaaataatcttattagatacatattat
aaaaatttaacagcatatgaagaagcaaaaggaaaaaatgaactacctgattttgtacaa
cctccaaccaaaccattaggaagaccagaattgttaaataaagatcctcatgaatttata
atagaaattatgtgtaatataaaaaataatattctaaatgaagttctaatatcattacca
ttttcatatgcatataaattattagattatattaaaacatatttaatatcatttcatttt
tttcaaaaaatacaagataattataaaaaatatctttcttgtggaaattttaatttctat
gtagaatattctataaatattgtcttaacaattattaatatatatagaaatcaatttcta
tttgataataaattccgttttcttctttatgaattacaacaactaatattacctcatctc
aaaaaatcagtagaccaatgtgcttttaatcaaacaacactcaattttttaatgtattcc
atggatgacgatgaactaaatttagatcatattcttcaaaataattcttttataaataaa
gaaacaaaaaaaatagatcaacaacaggggcatgcaaagggtcaatag

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