Pusillibacter faecalis: MM59RIKEN_00430
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Entry
MM59RIKEN_00430 CDS
T07635
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pfaa
Pusillibacter faecalis
Pathway
pfaa03030
DNA replication
pfaa03430
Mismatch repair
pfaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MM59RIKEN_00430 (dnaE)
03430 Mismatch repair
MM59RIKEN_00430 (dnaE)
03440 Homologous recombination
MM59RIKEN_00430 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfaa03032
]
MM59RIKEN_00430 (dnaE)
03400 DNA repair and recombination proteins [BR:
pfaa03400
]
MM59RIKEN_00430 (dnaE)
Enzymes [BR:
pfaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MM59RIKEN_00430 (dnaE)
DNA replication proteins [BR:
pfaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MM59RIKEN_00430 (dnaE)
DNA repair and recombination proteins [BR:
pfaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MM59RIKEN_00430 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF655
T2SSK
DUF3502
Motif
Other DBs
NCBI-ProteinID:
BCK82724
UniProt:
A0A810Q414
LinkDB
All DBs
Position
complement(37474..40962)
Genome browser
AA seq
1162 aa
AA seq
DB search
MSFVHLHVHTEYSLLDGACRIRDLPKIVKEMGQTACAVTDHGVMYGAIDFYRACQAEGIK
PIIGCEVYVTPQGRSRFDKIHEFDAESRHLVLLCENEEGYRNLSYLVSAGWTEGFYIRPR
IDLELLREHSAGLIALSACLAGEIPRRLRNGEYENAKQYALELAEIFGPERFYLELQDHG
IQDQQAVNQGVLRIHQETGLPMVCTNDAHYLRKEDAEAHDVLLCIQTGKTLDDENRMRYE
PRNFYLRSEAEMAALFHVYEGALENTQKIADMCHLEFTFGKYHLPEFQLPPGYDSFSYLK
KLCDEGYQARYGGNDQYRGQLHYEQEMIEKMGFTDYFLIVSDFVRYAKSVDIPVGPGRGS
AAGSMVSYCLGITDIDPMKYSLYFERFLNPERVSMPDIDMDFGDTRRDEVFEYVRRKYGD
DHVAHIVTFGTMAARGVIRDVGRVMNIPYADVDVIAKQVPAGPGALHITLDDALRLSKPL
SDAYDTDPQVRRLIDTAKALEGMPRHASTHAAGVVITKNPVVEYVPLSKNDDTVVCQYVM
TTLEELGLLKMDFLGLRNLTVLDDAVKMVQERQPDFSLKDIPEDDRDTFEMISAGKTSGV
FQMESTGMTGVCVGLKPQNIEDITAIIALYRPGPMDSIPRFIACKHNSSLIRYRHPSLEP
ILSVTYGCIVYQEQVIQIFQQLGGYSLGQADMVRRAISKKKAAQIQREKDAFIHGDRERK
IAGCVANGIPEATAEAIYQEIYDFANYAFNKAHAVAYAVVAYQTAYFKCHFTKEYMAALL
TSVLDNSDKVAGYINECKECGIDLLPPDINRSADRFTVEEGGIRFGLVAIKNIGRGFIQA
VMRQREERPFASLNDFCQRMQGSDMNKRAVENLIRSGAFDSLGGRRSQLIQVYEKVMDSV
AAVRRDNVEGQMDFFSMAAGTQSSAEKETPLPDIPEFSVQELMLMEKATTGLYLSGHPMD
QYRDAVHKLGAPTIGSILEDFSQEGGPTRFADGQRITICGVVSSSKTKTTKNNSLMAYVM
VEDDTAAIELLCFSKVLDTCGAYLKENQAVVVRGKLSVRDEKSPQIMCDSAYLLSTVSGS
IPPIQEAGEKLVQGETLFLKFPSLDHPSMRHMKLVFSMFPGTSQVKMVMADTRKVFATQV
LLHRALIQEARETLGEENVVVK
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgtccatttgcatgtccatacagaatatagcctcttggacggagcctgccgc
atccgggatttgccgaagatcgtcaaggagatggggcagaccgcctgcgcggtcacagac
cacggtgtgatgtacggcgcgattgatttctaccgcgcctgccaggcagagggaatcaaa
cccatcatcggctgcgaggtgtacgtgacgccccagggccgttcccggtttgataaaatc
catgagtttgacgcggagagccgccatctggtgctgctgtgcgaaaatgaggaggggtac
cggaatctctcttacctggtctcagcgggatggacggaggggttctatatccgcccccgg
attgatttggagctgctgcgagaacacagcgcagggctgatcgccctctctgcgtgcctc
gcaggggagattccacggcggctgcggaacggagaatatgaaaacgccaagcagtatgcg
ctggaactggccgagatctttgggccagagcggttctacctggagctccaggaccatggc
atccaggatcagcaggcagtcaaccaaggagtgctgcgcattcaccaggagacggggctg
cccatggtatgcacgaacgacgcacactatctccgcaaggaggacgcggaggcccacgat
gtgctgctgtgcatccagaccggcaagacgctggacgatgagaaccggatgcgctatgag
cctcggaacttctacctgcgcagcgaggcggagatggccgcccttttccatgtctatgag
ggcgcgctggaaaatacccagaagatcgcggatatgtgccatctggaatttaccttcgga
aagtatcacctgccggagttccagctgcctccgggctatgacagcttttcctacctgaaa
aagctttgcgacgaagggtatcaggcccgctacggtgggaacgatcagtatcggggccag
cttcactatgagcaggagatgattgagaagatgggctttacagactactttctcatcgtc
tcggattttgtccgttacgccaagagcgtggacatccccgtagggcccgggcggggcagt
gcggcggggtccatggtcagctactgtttggggatcacggacattgaccccatgaagtac
agcctctatttcgagcgttttttgaacccggagcgggtcagcatgccggatattgacatg
gacttcggagatacccggcgggacgaggtctttgagtatgtccgcagaaagtacggcgac
gaccatgtggcccatatcgtgacctttggcaccatggcggcgcggggtgtgatccgggac
gtgggccgggtgatgaacatcccctatgcggatgtggatgtgatcgccaagcaggtaccc
gccggccccggtgccctccatatcaccttggatgacgcactgcggctctccaagcccctc
agcgacgcctatgacaccgatcctcaggtccggcggctcatcgacactgccaaggctttg
gaggggatgccccgccacgcctccacccacgctgccggtgtggtcatcaccaagaatccg
gtggtagagtatgtgcccctctcaaaaaacgatgatacggtggtttgccagtatgtcatg
acaacgctggaggagctggggcttctcaaaatggactttctgggcttaagaaacctgacg
gtgctggacgatgccgtgaagatggtacaggagcggcagccggacttctctctgaaggat
atcccggaggacgaccgggatacctttgagatgatctcggccggcaagacctctggcgtg
ttccagatggagtctaccggtatgacaggtgtgtgtgtgggtcttaagccccaaaatatt
gaggatatcaccgcaatcatcgccctttaccgaccgggtcctatggactcgatcccccgc
tttatcgcctgtaagcacaattcctcactgatcagataccgccatccgtctctggagcca
attctctccgtcacctatggctgcatcgtttaccaggagcaggtgattcaaatcttccag
cagctgggcggctactctctggggcaggcagatatggtgcggcgggccatctccaagaaa
aaggccgcccaaatccagcgggagaaggatgccttcatccacggagatcgggagcgaaag
atcgccgggtgcgtggccaatggaattccggaggccacggcggaagccatttatcaggag
atctacgattttgccaattacgccttcaacaaggcccacgcagtggcctatgcggtggta
gcctaccagacggcgtattttaagtgtcactttaccaaggagtatatggcggcgctgctg
accagcgtcttggataactccgacaaggtggcgggctatatcaatgagtgcaaggagtgc
ggtattgatctgctgccgccggacatcaaccgctccgccgaccgctttactgtggaagaa
ggcggcatccgctttggcctggtggcgattaagaatatcggccgaggctttatccaggcc
gtgatgcgccagcgggaagagcgccccttcgcctctttgaatgacttctgccagcggatg
cagggcagcgacatgaacaagcgggcggtggagaacctgatccgctccggagcctttgac
tctctgggaggccgccggtcccagctgatccaggtatatgagaaggtcatggattccgtc
gcggcagtgcggcgagacaatgtagagggacagatggacttcttttccatggctgctggc
acccaaagcagcgcagaaaaggagacaccgctgccggatattccggagttctccgtccag
gagctgatgctgatggaaaaggccactacgggactctatctctccggccatcccatggat
cagtatcgggacgcagtgcacaagctgggagcacccaccatcggctccatcctggaagat
ttttcccaggagggaggccccacccgctttgccgatggtcagaggatcaccatctgcggc
gtggtgtcttccagcaagaccaagaccacgaaaaataactccctcatggcctacgtcatg
gtagaggacgataccgcagctatcgaactgctgtgcttttccaaggtactggacacctgc
ggcgcgtatctgaaggagaatcaggcggtggtggtgaggggaaaactctccgtccgggac
gagaagtccccgcagatcatgtgcgactccgcgtatctcctctccactgtcagcggcagc
atcccgcctattcaggaggccggtgagaagctggtgcagggtgagacgctgtttctgaaa
tttcccagcctggaccatccttccatgcggcatatgaagctggtgttttccatgtttcct
ggtacctcccaggtcaaaatggtgatggcggacacccgtaaggtctttgccacgcaggtc
ctgttgcaccgggcgctgattcaggaggcccgtgagactttgggagaggaaaatgtggtg
gtaaaataa
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