Pusillibacter faecalis: MM59RIKEN_04530
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Entry
MM59RIKEN_04530 CDS
T07635
Symbol
recD2_1
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pfaa
Pusillibacter faecalis
Pathway
pfaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MM59RIKEN_04530 (recD2_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfaa03400
]
MM59RIKEN_04530 (recD2_1)
Enzymes [BR:
pfaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MM59RIKEN_04530 (recD2_1)
DNA repair and recombination proteins [BR:
pfaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MM59RIKEN_04530 (recD2_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
PIF1
AAA_22
Helicase_RecD
nSTAND3
T2SSE
HHH_2
NTPase_1
PhoH
AAA_5
NPHP3_N
AAA
AAA_16
AAA_28
SRP54
TsaE
AAA_12
Thymidylate_kin
Mg_chelatase
SLFN-g3_helicase
DUF6891
CbiA
TrwB_AAD_bind
AAA_29
DUF815
DEAD
bpMoxR
AAA_18
NACHT
Motif
Other DBs
NCBI-ProteinID:
BCK83134
UniProt:
A0A810Q565
LinkDB
All DBs
Position
complement(442067..444262)
Genome browser
AA seq
731 aa
AA seq
DB search
MEELATYEGAVHSVIFQNAENGYTVLRLLVEGGEVITVVGCIPCVAPGEQLAVSGVWEQH
PQHGGQLRAVELERTLPEDEEEIFSYLASGICRGVGPATARRIVDRFGKAALDILEREPE
RLNLIKGITAKKAQEIAESFRRQMGLRRLMEFLARYQLPPVLAMQLRQRYGDGALDQVRE
NPYLLSGDACGVAFSVTDEIAMSLGMSAESKERLEAAVTFELSHNEGNGHVFLPRDKLIA
ATCQLLQDGDPERLEAALDALVERGTVVREQVAGVDACYLRRLWEAETSACLRLNGLLAA
TVDTSRQADRTLAEIETEAGITYAPQQRQAVRLAAERGVLILTGGPGTGKTTTVRGIVAL
LQKMGLEIVLAAPTGRAAKRMSELTGMEAQTIHRLLGMNWTEGMVSFQKTEKEPLEADAV
IVDEMSMVDLTLFAALLRALRPGTRLVLVGDADQLPSVGAGNVFADLIRSGRVETVFLRE
VFRQAEKSAIIRNAHAVNQGQPIGLTNDQEDFFFLCRRDAQRVVDTVVELCRDRLPGNMG
IPADQIQVLTPTRKGPSGTLRLNQLLQEALNPRAPGKRELQWGERLFREGDRIMQTRNDY
EVVWTRSDGMLGTGMFNGDVGRIVQIDPAGEWLEMDFDGRTASYSAEMLSEVELAYAMTV
HKAQGSEYRCVVFAAMPSAPSLMVRGVLYTALTRARELMIVVGDDAAIRSMAANDRQQRR
YSGLRWRLAHS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggccacctatgagggcgccgtacatagcgtcatttttcaaaatgccgaa
aacggctatacggttctgcggcttctggtcgaggggggcgaggtgatcaccgtggtgggg
tgtattccctgtgtggcgccgggggagcagctggcggtctccggcgtgtgggaacagcac
ccccagcatggcgggcagctgcgggctgtggagctggagcggacattgccggaggacgag
gaggagatttttagctacctcgcctccggcatctgccggggtgtgggtcctgccacagcg
cggaggattgtagaccgctttggcaaagccgctctggatattctggaacgggagccagag
cggttgaacctgatcaaggggattacggcgaaaaaggctcaggagattgccgagagcttt
cgccggcagatggggctgcggcggctgatggagttcctggcacgctaccagctgccgccg
gttttggctatgcagcttcgccagcgctatggtgacggggcgctggatcaggtgcgtgag
aacccgtacctcctctccggcgacgcgtgcggcgtggccttttctgtcacggacgaaatc
gccatgagcctgggaatgtccgctgagagcaaagagcggttggaggcggcagtgaccttt
gagcttagtcacaacgagggaaacggccacgtctttttgccccgggacaagctgattgca
gccacctgccagcttttacaggatggggacccggaacggctggaggcggcgctggacgca
ctggtggagcggggaactgtggtgcgggagcaggtagccggcgtggatgcctgctatctc
cgaaggctgtgggaggcggaaacctccgcctgcctgcggctgaatggtctgcttgcggcc
accgtcgacaccagccgtcaggcggacaggacgctggcggagattgagacggaggcgggg
attacctacgccccccagcagcgtcaggcggtgcgccttgcggcggagcggggggtgctg
atcctcaccggcggccccggcaccggcaagaccaccactgtacgggggattgtggcccta
ttgcagaagatggggctggagatcgtgctggcggcgcccacaggccgggcggccaagcgg
atgagcgagctgacgggtatggaggcccagaccatccaccgcctgctgggcatgaactgg
acggagggaatggtaagtttccagaagacggagaaggagccgctggaggcggacgcggtg
attgtggacgagatgagtatggtggacctgacactctttgccgcgctgctgcgggcgctc
cggcccggaacccggttggtgctggtgggggatgcggaccagctgccctcagtgggggcg
gggaacgtatttgctgatcttatccgcagcggccgggtggagaccgtctttttgcgggag
gtcttccgccaggcggagaagtccgccatcattcgcaacgcccacgcggtcaaccaggga
cagcccattggcctgaccaacgaccaggaggacttcttcttcctctgccgccgggatgcc
cagcgggtggtggacacagtggtggagctgtgccgggaccgcctgccgggaaacatgggg
attcccgccgaccagattcaggtgctgacccccacccggaagggcccctccgggaccctc
cgcctcaatcagcttttgcaggaggctctgaaccccagggctccgggtaagcgggagctc
cagtggggcgagcggctgttccgggagggggaccgaatcatgcagacccgcaacgactat
gaggtggtctggacccggagcgatggtatgctgggcaccggcatgttcaacggcgatgtg
ggccgaattgtgcagatcgacccggcgggggaatggctggagatggacttcgacggacgc
acggcctcctactcggcggagatgctcagcgaggtggagctggcctatgccatgactgtc
cacaaggcccagggcagcgagtaccgatgcgtggtgtttgctgccatgccgtcggcccca
tcgctgatggtgcggggcgtgctctataccgccctgacccgggccagggagctgatgatc
gtggtgggggacgacgcggccatccgctccatggcggccaacgaccgtcagcagcggcgc
tactcgggtctccggtggcggctggcccacagctaa
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