Pusillibacter faecalis: MM59RIKEN_13940
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Entry
MM59RIKEN_13940 CDS
T07635
Symbol
pnp_1
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pfaa
Pusillibacter faecalis
Pathway
pfaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MM59RIKEN_13940 (pnp_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfaa03019
]
MM59RIKEN_13940 (pnp_1)
03016 Transfer RNA biogenesis [BR:
pfaa03016
]
MM59RIKEN_13940 (pnp_1)
Enzymes [BR:
pfaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MM59RIKEN_13940 (pnp_1)
Messenger RNA biogenesis [BR:
pfaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MM59RIKEN_13940 (pnp_1)
Transfer RNA biogenesis [BR:
pfaa03016
]
Prokaryotic type
tRNA degradation factors
MM59RIKEN_13940 (pnp_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
SPATA25
KH_2
Dit-like_CBM2
Par3_HAL_N_term
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BCK84075
UniProt:
A0A810QBY4
LinkDB
All DBs
Position
1354118..1356268
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AA seq
716 aa
AA seq
DB search
MSTIITKRQFPNYRKYEMELAGRPLFLEVGKLAELANAAVMVGYGDTRVLVCATASPRPR
DGIDFFPLSVDFEEKMYAVGRIPGSFNRREGRPGEKGILTSRVIDRPIRPLFPYDFRNDV
SIMATVMSVDHDCSPEIAALIGTSAALAISDIPWNGPVGALKVGLVDGKLVLNPDAEQRK
VSDLDVTVVSTGKKVVMIEAGANEVDNDTMFNAIQLAHEENQKQIALINQMVSEIGKPKF
DYPHADFDQALFDRIVADFMDEAKAAMDTDDKNIRESRWNAMIEKWHEAYLEEFPNMDQY
LDEITYKFQKKIVKAWLLEGHRVDGRAKNEIRPLGAEVGVLPRVHGSGLFTRGQTQVLSA
CTLDTLSANQKLDTIWEETEKRYMHHYNFPGYSVGEAKPARSPGRREIGHGALAERALLP
VIPSVEEFPYAIRVVSEVVSSNGSTSQGSICGSTLALMDAGVPIKAPVAGISCGLIQDDD
GAFTTFIDIQGVEDFHGEMDFKVAGTKKGITAIQMDLKNDGLTMAIIREALDTTYDARCE
ILDQIMLPVIAEPRKEVSRYAPKMITMHIDPDKIRDVIGKGGSVIQKIVADTGAKIDIND
DGSIFIASADAAGCDAAKKCIDDIVFVPEIGKLYYGRVVRLMTFGAFVELAPGKDGLVHI
SKLADHRIEKVEDACKIGDMMWVKVTDIDEKGRVNLSHKDAMKEIAAKEAAGERIK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccatcatcacaaaaagacagttccccaactaccgcaagtacgagatggagctg
gccggacgccccctgtttttagaggtgggcaagctggcggagctggccaacgccgccgtc
atggtgggctacggcgacacccgggttctggtgtgcgccaccgcctctccccgtccccgg
gacggcatcgacttcttccctctgagcgtggactttgaggagaagatgtatgctgtgggc
cgcatccccggctccttcaaccgcagggagggccgtcccggcgaaaagggcatcctgacc
agccgcgtcatcgaccgccccatccgccccctcttcccctatgacttccgcaacgacgtc
tccatcatggccactgtcatgagcgtggaccacgactgctcccccgagatcgccgccctg
atcggcacctccgccgccctggccatctccgacatcccctggaacggccccgtgggcgct
ttgaaggtgggccttgtggacggcaaactggtcctgaaccccgacgccgagcagcgcaag
gtctccgatctggacgtgaccgtggtctccaccggcaagaaggtggtcatgatcgaggcc
ggcgccaacgaggtggacaacgacaccatgttcaacgccatccagctggcccatgaggag
aaccagaagcagatcgctctgatcaaccagatggttagtgagatcggcaagcccaagttc
gactacccccacgccgactttgaccaggccctcttcgaccgcatcgtggccgactttatg
gacgaggccaaggccgccatggacaccgacgacaagaacatccgggagtcccgctggaac
gccatgatcgagaagtggcacgaggcctacctggaggagttccccaacatggaccagtac
ctggacgagatcacctacaagttccagaagaagatcgtcaaggcctggctgctggagggc
caccgggtggacggccgcgccaagaacgagatccgacccttgggcgctgaggtgggcgtg
ctgccccgggtccacggctccggcctcttcacccgcggccagacccaggtcctctccgcc
tgcaccctggacaccctctccgccaaccagaagctggacaccatctgggaggagacggag
aagcgctatatgcaccactacaacttccccggctactccgtgggcgaggccaagcctgcc
cgctcgccggggcggcgtgagatcggccacggcgcgctggccgagcgggccctgctgccc
gtgatcccctctgtggaggagttcccctacgccatccgcgtggtctctgaggtggtctcc
tccaacggctccacctcccagggctccatctgcggctccaccctggcgctgatggacgcc
ggcgtgcccatcaaggcccctgtggccggcatctcctgcggcctcatccaggacgacgac
ggcgccttcaccaccttcatcgacatccagggtgtggaggacttccacggcgagatggac
ttcaaggtggccggcaccaagaagggcatcaccgccatccagatggacctgaagaacgac
ggcctcaccatggccatcatccgggaggccctggacaccacctacgacgcccgctgcgag
atcctggatcagatcatgctgccggtcatcgccgagccccgcaaggaggtcagccgctac
gcccccaagatgatcaccatgcacattgatcccgacaagatccgggacgtcatcggcaag
ggcggcagcgtgatccagaagatcgtggccgacaccggcgccaagatcgacatcaacgac
gacggctccatcttcatcgcctctgccgacgccgccggctgcgacgccgccaagaagtgc
attgacgacatcgtgttcgtccccgagatcggcaagctctactatggccgcgtggtgcgc
ctgatgaccttcggcgcctttgtggagctggctcccggcaaggacggtctggttcacatc
tccaagctggccgaccaccggatcgagaaggtggaggatgcctgcaagatcggcgacatg
atgtgggtgaaggtcacagacatcgacgaaaagggccgggtaaacctctcccacaaggac
gccatgaaggaaattgcggccaaggaggccgccggcgagcggattaagtaa
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