Pusillibacter faecalis: MM59RIKEN_17540
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Entry
MM59RIKEN_17540 CDS
T07635
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
pfaa
Pusillibacter faecalis
Brite
KEGG Orthology (KO) [BR:
pfaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfaa03032
]
MM59RIKEN_17540 (hupA)
03036 Chromosome and associated proteins [BR:
pfaa03036
]
MM59RIKEN_17540 (hupA)
03400 DNA repair and recombination proteins [BR:
pfaa03400
]
MM59RIKEN_17540 (hupA)
DNA replication proteins [BR:
pfaa03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MM59RIKEN_17540 (hupA)
Chromosome and associated proteins [BR:
pfaa03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MM59RIKEN_17540 (hupA)
DNA repair and recombination proteins [BR:
pfaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MM59RIKEN_17540 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BCK84435
UniProt:
A0A810QCZ3
LinkDB
All DBs
Position
1742457..1742732
Genome browser
AA seq
91 aa
AA seq
DB search
MNKAELINAVAAATEFSKKDAEAAVTATLEAITSALKDGDKVQLVGFGSFEVKKRAARVG
RNPKTNDTIEIPASVVPVFKAGKALKDAVAK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggctgaactgatcaatgctgtggccgctgccaccgaattttccaaaaaggac
gcagaagccgctgtcaccgccaccctggaggcgatcaccagcgcgctgaaggacggtgac
aaggttcaacttgtgggctttggctcttttgaggtgaagaagcgcgccgctcgtgtcggc
aggaatcccaagaccaatgataccattgagattcctgcgtctgtggtgcccgtgtttaag
gctggcaaggctctgaaggacgctgtggcgaaataa
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