Pusillibacter faecalis: MM59RIKEN_23670
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Entry
MM59RIKEN_23670 CDS
T07635
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pfaa
Pusillibacter faecalis
Brite
KEGG Orthology (KO) [BR:
pfaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfaa03032
]
MM59RIKEN_23670 (topA)
03400 DNA repair and recombination proteins [BR:
pfaa03400
]
MM59RIKEN_23670 (topA)
Enzymes [BR:
pfaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MM59RIKEN_23670 (topA)
DNA replication proteins [BR:
pfaa03032
]
Prokaryotic type
DNA Topoisomerases
MM59RIKEN_23670 (topA)
DNA repair and recombination proteins [BR:
pfaa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MM59RIKEN_23670 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
DNA_ligase_ZBD
HVO_2753_ZBP
Toprim_4
DUF1272
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
BCK85048
UniProt:
A0A810Q9W8
LinkDB
All DBs
Position
2352204..2354573
Genome browser
AA seq
789 aa
AA seq
DB search
MAKQSLVIVESPAKAKTIGKYLGKDFEVKACMGHLRDLPKSKTGVDVENDFEPVYKPIKG
KEDIISDLKKSAKAADTVYLATDPDREGEAISWHLKQLLDLPDEKTKRVTFNEITKNVVQ
ESIRQPRDIDQNLVDAQQARRILDRLVGYELSPLLWKKIRRGLSAGRVQSVATRMVDDRD
REIEEFQPEEYWTLDANLLGADVKKTPFAARYHGKNGKKAELKNEEAVNAVVRETEGEPF
VVQTVKRTDKQRSPSPPFTTSTLQQEASRKLSMTPRRTMAIAQQLYEGVDIEGEGTVGLI
TYMRTDSLRLSEEALSAAKEFIVGRYGPAYAETHRYKTKAGAQDGHEAIRPSNVNLTPEQ
VKKDLTGEQYRLYRLVWSRFVACQMSNAVYDSVSVEITAGGHAFRATSSSLKFSGYTAVY
EEGKDEEKEERESPLPALREGETLALRDFSKDQHFTQPPAHYTDASLIRAMEEQGIGRPS
TYAPTVSTILDREYVIKDGKYLRITNLGRVVTALMKDKFSDIADMKFTANMEEKLDSVEE
GKTPWKGVLRDFYGDFESHLRQAEQDLTRIKVPDEVSEEICPECGRNLVVKSGRFGRFLA
CPGYPECSFTMPLVVAMPGRCPKCGGRIMKRTGNSKKTGKQYTYYCCEHVNSRDEANKCD
FMTWDVPVKDDCPVCGHTMFKKAGKGFKKPFCINPVCPNFLPEDKRGYPKKPAAESAAET
AETNETAEGTDEQAEKTAVKKAAAKKPAAKKNAAKAASKSTSKAAAKTASKTTAKKKTTV
KTKKSAEED
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacagagtttggtcattgtggagtcgcccgcaaaggccaaaaccattggaaaa
tatctgggcaaggactttgaggtgaaggcctgcatgggccacctgcgggacctgcccaag
agcaaaaccggcgtggatgtggaaaacgatttcgagccggtctataagcccatcaagggc
aaagaggacatcatcagcgatctgaaaaagtccgcaaaggcagcggacactgtgtacctt
gccaccgacccggatcgggagggcgaggcgatctcctggcaccttaagcagctgctggac
ctgccggacgaaaaaacaaagcgggttacgttcaacgagattacgaagaacgtggtgcag
gagagcatccgacagccccgggacattgaccagaacttggtggacgcccagcaggcccgc
cggattctggaccggctggtgggctatgaactcagcccgcttttgtggaagaagatccgc
cggggcctctccgccgggcgggtgcagtcggtggccaccaggatggtggatgaccgggac
cgggagatcgaggagtttcagccggaggagtactggacactggacgcgaatctcctgggg
gcagacgtgaaaaaaacaccttttgccgctcgttaccacgggaaaaacggcaaaaaggcg
gagctgaagaatgaggaggcggtgaacgccgttgtgcgggagacggagggcgagcccttc
gtggtccagacggtgaagcgcacggacaagcagcgcagcccctccccgccattcaccacc
tccacgctccagcaggaggcatcccgcaagctctccatgaccccccggcggacgatggca
attgcccaacagctctacgagggcgtggatatcgagggcgagggtaccgtgggtctcatt
acctatatgcgtaccgactccctgcgcctgagcgaggaggctctctccgccgcaaaggag
ttcatcgtgggccgctacggccccgcgtatgccgagacccaccgctataagacaaaggcc
ggggctcaggacggccacgaggctatccgccccagcaacgtgaacctgacgccggagcag
gtgaaaaaggaccttaccggcgagcagtaccggctctaccgcttggtttggagccggttt
gtggcctgccagatgtccaacgccgtgtacgacagcgtatctgtggagattaccgccggc
ggtcacgcgttccgtgccacctcctccagcctgaagttctccggctacaccgccgtgtac
gaggagggcaaggacgaggagaaggaggaaagggaatccccgctgcccgctctgcgggag
ggagagaccttggcgctgcgggatttctccaaggaccagcacttcacccagccccccgct
cactatacagatgcctccctgatccgggccatggaggagcagggcattggccgtccctcc
acttacgcgcccacagtgtccactattctggaccgggaatacgtcatcaaggatggcaaa
tacctgcgcatcaccaacctgggtcgtgtggtgacggcgctgatgaaggataaatttagc
gacatcgcggacatgaagttcaccgccaacatggaggagaagctggactccgtagaggaa
gggaagaccccctggaagggagttctgcgggacttctacggggactttgagagccacctg
aggcaggcggagcaggacttgacccgtatcaaggtgcccgacgaggtcagcgaggagatc
tgcccggagtgcgggcggaatctggtggtgaaatccggccggttcggtcgctttctggcc
tgcccgggttacccggagtgcagcttcaccatgccgctggtggtggccatgccgggccgc
tgccccaagtgcggcgggcgcatcatgaagcgcaccggcaacagcaagaagaccggaaag
cagtatacctactactgctgcgagcatgtgaacagccgggacgaggccaacaagtgcgac
ttcatgacctgggatgtgccggtgaaggacgactgcccggtgtgcggccacacgatgttc
aaaaaggccggcaaaggctttaagaagcccttctgcatcaacccggtgtgtcccaatttc
ctgccggaggacaagcgcggttatccgaagaagcccgcggcagagtccgccgctgagacg
gcggagacaaacgaaacggcggaggggaccgacgagcaggctgaaaaaactgccgtcaag
aaagccgccgcgaaaaagcctgcggccaagaaaaatgcggcgaaagcggcatctaaatct
acgtccaaagccgccgcgaagaccgcgtccaagaccacagcgaaaaagaagaccaccgtc
aagacgaagaaatccgcagaggaggattaa
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