Pusillibacter faecalis: MM59RIKEN_28130
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Entry
MM59RIKEN_28130 CDS
T07635
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pfaa
Pusillibacter faecalis
Pathway
pfaa03030
DNA replication
pfaa03410
Base excision repair
pfaa03420
Nucleotide excision repair
pfaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MM59RIKEN_28130
03410 Base excision repair
MM59RIKEN_28130
03420 Nucleotide excision repair
MM59RIKEN_28130
03440 Homologous recombination
MM59RIKEN_28130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfaa03032
]
MM59RIKEN_28130
03400 DNA repair and recombination proteins [BR:
pfaa03400
]
MM59RIKEN_28130
Enzymes [BR:
pfaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MM59RIKEN_28130
DNA replication proteins [BR:
pfaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MM59RIKEN_28130
DNA repair and recombination proteins [BR:
pfaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MM59RIKEN_28130
NER (nucleotide excision repair)
GGR (global genome repair) factors
MM59RIKEN_28130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
TrkA_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BCK85494
UniProt:
A0A810QBY0
LinkDB
All DBs
Position
2746620..2749277
Genome browser
AA seq
885 aa
AA seq
DB search
MKLMVIDGNSMINRSFYGIRPLSTRDGLYTHAVFGFLTTLTRLREEEKPDAVCVTFDVHA
PTFRHTADESYKATRKPMPEELRMQMPVLKEVLDALNIPRYELEGWEADDLIGTISRRCE
ADGWECVVVTGDKDSLQLITDHTKVKLVSTCMGQTTTRDMTEETFREQYGFAPIHMIDLK
ALMGDASDNIPGVPGVGEKTAMGLVQMYGSIDRLYDHMPEIVTAPETPARPNVVKKLAEG
EESARHSYWLATIATDAPLDFRPEENLVRAPGPEAYPLFLRLEFSKLIEKFGLTAEAETR
SDFTATVEQVTDPEQAERLLEIWRKADHVSLLALPDLNGISVTCRTGENTTMTAELFYDK
YQGDWNGLLEVLFSADIRKASHNVKDLMRALLENQLPAEGFLFDTALAAYLLDATAGSYD
LQRLFVTYYNEELPKPIYLDAEAFSMLGDVAQAEAALDSYAVAVDALYGTLSARLRELGL
QDLFERAELPLCRVLAEMELTGCRVDKGALVSFGEMLTGWIAEQERRIYEMAGEAFNINS
PKQLGEILFGKLGLPHGKKTKTGWSTNADVLEKLRYEAPIVGAVLEYRQYAKLKSTYAEG
LLKALGPDGRIHTSFQMTVTATGRLSSTEPNLQNIPTRTDLGSEIRRMFVPAEGCVLVDA
DYSQIELRLLAHISGDENMRAAFASGADIHTATAAQVFHVAPEEVTPEMRRSAKAVNFGI
VYGISAFSLSQDIGVSVAEAKAYMEAYFATFPGVRRYMDQVVEGARESGYVETMFHRRRE
LPELKSSNFNLRSFGERVALNMPIQGTAADIMKLAMIAVWRRLRTEQPQARLVLQVHDEL
IVECPADEAEAVARLLEEEMEHVVQLSVPLTAEAHWGKDWLAAKG
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcatggtcatcgacggcaactccatgattaaccggtccttttatggcatccgg
cccctttccacccgggacgggctgtatactcatgccgttttcggcttcctgaccacgctg
acgcggctgcgggaggaggaaaagccggacgctgtgtgcgtcacttttgacgtccatgcg
ccaacctttcgccatactgcggacgagagctataaagccactcgaaaacccatgccggag
gaattgcgaatgcagatgccggttttgaaagaggtcctggacgcactgaacattccccgc
tatgaactggaggggtgggaggctgatgatttaatcggcaccatctcccgccgatgtgag
gcggatgggtgggagtgcgtcgtagtcaccggagataaggacagtttgcagcttattacg
gaccatacaaaggtaaagctggtgtccacctgtatggggcagaccaccaccagggacatg
acggaggagaccttccgggagcagtacggctttgcacccatccacatgattgatctgaaa
gccctgatgggggacgcctctgacaacattcccggagtaccgggcgtcggagaaaagacc
gccatggggctggtacagatgtatggctctatcgaccgtctctatgaccatatgccggag
attgtgacagcgccggaaacacccgcacgacccaatgtggtgaaaaagctggcggagggg
gaggaaagcgcccgccattcctattggttggcaaccatcgccaccgacgctccgctggac
ttccgaccagaggagaatctggtgcgtgcgcctggaccagaggcttacccgctgttttta
cggctggaattttccaagctcatcgaaaagttcggtctgacagcagaggcggagacacgc
tccgacttcaccgcgaccgtggagcaggtgacagatccggagcaggcggagcggctgctg
gaaatctggcggaaggcagaccacgtttccctgttggccttgccggacttgaacggcata
tcggtgacatgccggactggggagaacaccaccatgacggcggagctgttctacgacaag
taccagggggattggaacggtctgttggaggttctcttctccgcggatatccggaaggcc
tctcacaatgttaaggatttgatgcgtgcactgttggagaatcagcttcccgctgaggga
tttctctttgataccgccctggcggcctatctcctggacgccacggcgggcagctacgat
ttgcagcggctttttgtcacctattataatgaggagctgcccaagcccatctacttggac
gcggaggctttttccatgctgggggatgtggcacaggcggaggcggctcttgacagctat
gccgtggcggtggacgccctctatggtaccctctccgcgaggctgcgggagctgggcctc
caagacctctttgagcgggcagaactgcctctttgccgggtgttggcagagatggaactc
acgggctgccgggtggacaaaggagcgctggtctccttcggggagatgttgacggggtgg
atcgcggagcaggaacggcggatttatgagatggcgggggaggcgttcaacattaactcc
cccaagcagctgggggaaatcctctttggaaagttgggcctgcctcacgggaagaagaca
aaaaccggctggtccaccaatgccgacgttttggaaaagctccgctatgaggctcctatt
gtgggggcagtgctggaataccgccagtacgccaaattgaaatccacctatgcagagggc
ttgctgaaggccctggggccggacggccggattcacacgagcttccagatgactgtgacc
gcaacgggacgtctgagctccacggagccaaacttgcagaatattcccacccggacggat
ctgggcagcgaaattcgcaggatgtttgtcccggcggaggggtgcgtactggtggatgca
gattactctcagattgagctgcggctgctggcccatatctctggggatgagaatatgcgc
gccgcctttgcctccggcgccgatattcacaccgccacagcggcgcaagtatttcacgtt
gcgccggaggaggtcacgccagagatgcgccgcagtgccaaggcagtgaatttcgggatt
gtctatggaatttccgccttctccctcagccaggacatcggcgtgagcgtggcggaggcc
aaggcctatatggaggcgtattttgccaccttccccggtgttcggcggtatatggaccaa
gtagtggagggcgccagggagagcgggtatgtggagactatgttccaccgccggcgggag
cttccggagctgaagtcctcgaatttcaatctgcgctccttcggtgagcgggtggcactg
aacatgcccattcagggcacggcggcggatatcatgaagcttgccatgattgcggtctgg
cggcggctgcggacggaacagccacaggcgcggctggtgctccaagtccacgacgagctg
attgtggagtgtccggcagatgaggcggaggcggtggcgaggcttctggaggaggagatg
gagcacgttgtccagctctccgtccccttgacggcagaggctcattggggcaaggactgg
ctggcggccaagggataa
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