Phascolarctobacterium faecium: PFJ30894_00016
Help
Entry
PFJ30894_00016 CDS
T05784
Symbol
trpB_1
Name
(GenBank) Tryptophan synthase beta chain
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac00260
Glycine, serine and threonine metabolism
pfac00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pfac01100
Metabolic pathways
pfac01110
Biosynthesis of secondary metabolites
pfac01230
Biosynthesis of amino acids
Module
pfac_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PFJ30894_00016 (trpB_1)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
PFJ30894_00016 (trpB_1)
Enzymes [BR:
pfac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
PFJ30894_00016 (trpB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
DUF865
Motif
Other DBs
NCBI-ProteinID:
BBG62411
LinkDB
All DBs
Position
complement(17275..18645)
Genome browser
AA seq
456 aa
AA seq
DB search
MTKIPYKINLSEDELPKYWQNIRPYMQEAPDPFINPVTFKPCTADDLRPVFCDELIEQEL
DNTNKFIEIPEEIRDFYKMYRPSPLTRAYNLEKALGTPAEIYYKFEGTNTSGSHKLNSAV
AQVYYAKQQGLTHLTTETGAGQWGTALSMACGYFGIDLSVYMVKVSAEQKPYRKAVMETY
GARVIPSPSDTTEVGRRILAENPGTGGSLGCAISEAMEVSMKTDNCRYVLGSVLNHVVLH
QSIIGLETKIGLDKYGVQPDIVIGCAGGGSNLGGLITPFMADKLEGKNNIHFIAVEPASC
PSLTRGRYAFDFGDTGQTTPLMRMYTLGSGFMPSPNHSGGLRYHGMSPIVSKLYHDGMME
ARSVEQTKVFEAATMFCRCEGTLPAPESSHAIRVAMDEAIKCRETGEKKVIVFGLTGTGY
FDLAAYQAYNQGTMVDYVPTDEDLEKGFATLPKVEY
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaataccatataaaatcaatttatctgaagatgagctgccgaaatattggcag
aatattcgcccttatatgcaggaggctccggacccgtttatcaatccggtgacctttaag
ccttgtactgctgatgatctgcgccctgttttctgtgacgagctgattgagcaggagctg
gataataccaataaatttattgaaattccggaagaaatccgtgatttttataaaatgtat
cgtccatcaccattgaccagagcctataatttggaaaaagcgttgggtacgccggcagaa
atttactacaaattcgaaggcactaatacttccggttcgcataaactcaattctgctgtt
gctcaggtttattatgcgaagcagcaagggctgactcacctgactacggaaacaggtgcc
ggacaatgggggactgctctttcgatggcctgcggttattttggcattgatctttccgta
tatatggttaaggtttcagccgagcaaaaaccttatcgtaaggccgttatggaaacttat
ggtgccagagttattccttcaccttcggatactactgaagtaggacgcaggattttggca
gaaaaccccggtacaggcggatccttgggctgtgctatctcagaagcaatggaagtatcg
atgaaaacagataactgccgctatgtattaggcagtgtacttaatcatgtagtgctgcac
caaagtatcatcggcctggaaactaagatcggacttgataaatacggtgttcaaccggat
atagtcatcggctgtgccggtggcggttcgaaccttggcgggttgattacgccgtttatg
gcagataagcttgaaggaaaaaataatattcattttattgccgttgaaccggcttcctgc
ccttccttgacccgcggcagatatgcttttgatttcggtgataccggacaaactacaccg
ctgatgcggatgtatactttaggcagtggatttatgccttcacctaaccattccggtgga
ctccgttatcatggtatgtcgccgatcgtctctaaactttatcatgatgggatgatggaa
gcgcgcagcgtggaacagacaaaagtgtttgaagcagctacgatgttctgccgctgtgaa
ggtacattgcctgctcctgaaagttcacatgctattcgtgtagcgatggacgaagcaatt
aaatgtcgtgagaccggcgagaaaaaagttattgtttttggtttgaccggtactggctat
tttgatttagccgcttatcaggcttataatcagggaactatggtagattatgttcctact
gatgaagatttggaaaaaggctttgctacgctgccaaaagtagaatattaa
DBGET
integrated database retrieval system
