Phascolarctobacterium faecium: PFJ30894_00124
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Entry
PFJ30894_00124 CDS
T05784
Symbol
cdaR
Name
(GenBank) Carbohydrate diacid regulator
KO
K23253
PucR family transcriptional regulator, proline-responsive transcriptional activator
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfac03000
]
PFJ30894_00124 (cdaR)
Transcription factors [BR:
pfac03000
]
Prokaryotic type
Other transcription factors
Others
PFJ30894_00124 (cdaR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PucR
HTH_30
GGDEF_2
HTH_8
Motif
Other DBs
NCBI-ProteinID:
BBG62512
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Position
130012..131208
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AA seq
398 aa
AA seq
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MSVTCQDLLTLKYFERIKLVAGPNGLDRTVTWPYVGQTSTVSQWVHGGELLFITGIVHSA
DKLKDLILECIQKKLAGLVILVGNEYINSIPEELLAQADAADFPLFEMPWDVKLIDVTRE
ITDLIMRDKFEIKKSKNFLGRLLFASDVDYRQMLDTAIINDIQLLEYKFIAVFNVSHPAD
EIMTDAGHDSLEDKLQHSVDSLCKEKQLPVITLVYGNNVICLASAPTQEKAAEAAAYLET
VCGLLSQLYSGSNLYLSFGRPYADVEQIKISYQEAQKALLLWKKMGRSNHIVYYSQLGLY
RLLFKIDDKEEIREYYHYNLGVLLQHDSKNNSELLETLRQYLYCNGNLVKTSQALFIHRN
TLLYRLNQIRDLLGRDIDDALIRLELLSSIVAKDYLEE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttacctgtcaggatctattgactttaaaatattttgaacgtatcaagctggtt
gccgggccaaacggtctggaccgtacggtcacctggccctacgtaggacagacttcaact
gtctcgcaatgggtacacggcggcgaactgctgtttattaccggcattgtgcacagcgcc
gataaacttaaggatctcattttagaatgtatccagaaaaaattagccggtcttgtaatc
ttggtcggcaatgaatatatcaactctattccagaagaactgctggcccaggccgacgca
gccgatttcccgctttttgaaatgccctgggacgtaaagctgattgatgtaacgcgcgaa
ataaccgacctgataatgcgtgataaatttgaaatcaaaaagtcaaaaaactttctgggc
cgcctgctttttgcttccgatgttgattaccggcaaatgcttgatacagcgatcatcaac
gatatccaattactggaatataaatttattgctgtttttaacgtcagtcaccccgctgat
gaaatcatgacagatgcaggccatgacagccttgaagataaactgcagcattctgtcgac
agtctttgtaaagagaaacagctgccggtcatcacattggtctacggcaataatgtgatc
tgccttgccagcgcgcctacacaggaaaaagcagctgaggcggcagcttatctggaaacc
gtctgcggtcttttaagccagctctacagcggcagcaacctttacctcagctttggccgt
ccttacgccgatgtcgaacaaatcaaaatcagttatcaggaagcgcagaaagcgctgctg
ctctggaaaaagatgggacgcagcaatcacattgtctactattcccagcttggtttatac
cgcctgctgtttaaaatcgatgataaagaagaaatccgcgaatactatcactataatctc
ggtgtgctcctgcagcatgacagcaaaaataattcggagcttctggaaacgctgcgtcag
tacttatactgcaacggcaatcttgttaaaacatcacaggcactgtttattcaccgtaat
acacttttataccgtcttaaccagatccgtgatctgctggggcgcgatatcgacgatgcc
ctgatacgacttgagctgctgagcagcatcgtcgccaaagactacctggaagaatag
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