Phascolarctobacterium faecium: PFJ30894_00147
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Entry
PFJ30894_00147 CDS
T05784
Name
(GenBank) AAA-like domain protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfac03400
]
PFJ30894_00147
DNA repair and recombination proteins [BR:
pfac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PFJ30894_00147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
FtsK_SpoIIIE
AAA_10
AAA_22
ResIII
AAA
AAA_16
AAA_25
TrwB_AAD_bind
AAA_30
Hydrolase
P-loop_TraG
T2SSE
CbiA
Zeta_toxin
AAA_19
AAA_6
AAA_7
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BBG62535
LinkDB
All DBs
Position
complement(154530..156014)
Genome browser
AA seq
494 aa
AA seq
DB search
MYLADEHKIWVCKGEDKICMLPKMANRHGLIAGATGTGKTVTLKVLAESFSEMGVPVFLA
DIKGDVSGMCKAGESSEGFQKRLHKLGIENFEFKGFPVRFFDVFGKKGHPVRTTISEMGP
DLLSRLLELNTTQSGIMTIIFKIADDQGLLLLDLKDLRSMVQYVGDNAAQFKTAYGNVSA
QSVGAIQRALLRLEEQGGDVFFGEPALDIRDWLAVADDGRGYINLLHCVELFQTPLLYST
FLLWMLSELYDLLPEAGDPEKPKIVFFFDEAHLIFKDAPKSLLDKVEQIVRLIRSKGVGI
YFITQQPSDIPDTVLSQLGNKLQHALRAYTPKDQKGLKAAAQAFRANPDLDAAKVLPELG
TGEVLVSLLDADGVPTMVERAYVMPPRSYLGVADDTLRNQLIASSPLYSKYAEAVDRESA
YEILSAKAQQDAEAAARAQEEAALQKELRSRSAAAKKEPPTVAEKLISKTMTRMENKAVD
TIVRGIFNQMKKWF
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtatttagctgatgaacacaagatttgggtctgtaaaggcgaggataagatctgcatg
ctgccgaaaatggcaaaccgtcacggtctgattgccggggcaacgggtacgggcaagacc
gttactttaaaggtgctggcagaatccttcagcgagatgggcgtgccggtattcctggcc
gatatcaaaggcgacgtttccggtatgtgcaaggctggtgaaagcagtgaagggtttcag
aaacgtctgcataaattaggcatagaaaattttgagttcaaaggctttcctgtacgtttt
tttgatgttttcggtaaaaaagggcatcctgtccggacgactatttccgagatggggccg
gatctgctgagtcggcttttggaattgaataccacgcagagcggtattatgacgatcatt
tttaagattgccgatgatcagggactgttgctgctggatcttaaggatctgcgttcgatg
gtgcagtacgtcggtgataatgcggctcagttcaaaactgcctatggcaatgtgtcggct
cagagtgtaggcgcgatccagcgggcgctgctgcgcttggaagaacagggcggagatgtg
tttttcggcgagccggcactggacatcagggactggctggcagtagcagatgacggacgc
ggttatatcaatcttctgcattgcgtagagctgtttcagactccgctgttatattctaca
tttttattatggatgctgtcggagttgtatgacctgctgccggaagcaggcgatccggaa
aaacctaaaatcgtctttttctttgatgaagcgcatctgattttcaaagacgcgccgaaa
tctctgctcgataaagttgaacagatcgtgcgtttgatccgttccaaaggcgtcggcatt
tattttatcacccagcagccttctgatattccagatactgttttgtcacagctgggaaac
aagctgcagcatgcgctgcgagcttacacacctaaagaccagaaggggctgaaggctgcg
gcgcaggcctttagagccaatcctgatcttgacgcggctaaagtgctgccggagcttggc
accggcgaagtgctggtatcactattggatgctgacggagtgccgacaatggtggagcgt
gcttatgtcatgccgccgcgcagctatcttggcgtagctgacgacacgctgcgcaaccag
ctgatagcctccagcccgctgtatagtaaatatgctgaagctgtagaccgtgagtctgct
tatgagattttgagcgccaaagcccagcaggatgcggaagccgcagccagggcacaggaa
gaagcggcgctgcagaaagagctgcgcagccgcagcgcggctgccaaaaaagaaccgcct
acggtcgcggaaaagctgatcagcaaaacgatgacgcgaatggaaaataaagctgtagac
actatagtacgcggtatttttaatcaaatgaaaaaatggttttaa
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