Phascolarctobacterium faecium: PFJ30894_00178
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Entry
PFJ30894_00178 CDS
T05784
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac03030
DNA replication
pfac03430
Mismatch repair
pfac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PFJ30894_00178 (dnaX_1)
03430 Mismatch repair
PFJ30894_00178 (dnaX_1)
03440 Homologous recombination
PFJ30894_00178 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfac03032
]
PFJ30894_00178 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
pfac03400
]
PFJ30894_00178 (dnaX_1)
Enzymes [BR:
pfac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PFJ30894_00178 (dnaX_1)
DNA replication proteins [BR:
pfac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PFJ30894_00178 (dnaX_1)
DNA repair and recombination proteins [BR:
pfac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PFJ30894_00178 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
TIP49
AAA_30
AAA_22
RuvB_N
AAA_5
AAA_7
AAA_19
AAA_2
AAA_24
AAA_16
AAA_14
AAA_assoc_2
DNA_pol3_delta_C
DUF1176
Rad17
DUF815
AAA_18
Mg_chelatase
PIF1
AAA_6
RCF1-5-like_lid
AAA_28
Rep_fac_C
nSTAND3
RNA_helicase
PAXX
TsaE
Motif
Other DBs
NCBI-ProteinID:
BBG62566
LinkDB
All DBs
Position
complement(184411..186144)
Genome browser
AA seq
577 aa
AA seq
DB search
MAYVALYRRWRPQGFDALVGQDAVRIALSNALTTGRIAHAYLFAGPRGTGKTSTAKILAK
ALNCEQGPTANPCNECANCQRINDGSSMDVFEIDAASNRGIDEIRDLREKVMFAPVNGRY
KVYIIDEVHMLTTEAFNALLKTLEEPPAHIVFILATTEPHKIPATIHSRCQRFDFKRVTN
EDIAKRLREVADGSEIRADDEALKLIAIQSDGGMRDALSLLDQCGVMADTVTAETVRNVL
GIVGREALRELVRAIGRQDLSAALQLLNRLAEQGKDVRQILTELAEYLRAVLLYKASPGY
HEIYLTDTEEAISELAPLFGSDRLMAAEERLHQAMGELRFSARGRITAELCLFDLCRIEG
STIAALMARVEQLEHQVRSGVPLGAANSRTQIKPEPEEKQAAAVAAPAASRVKKAPAVSA
VQAPAAEPEPAAAVKAETEPKPVSEEAAAATTLEYSGDWTEGEDLWNQALEILKNEKKQS
MVACAAGGYVTGYENGVLTVGFKNKFMCVRMNDPDYKKAFEEVLLRLARQSVRLECITAA
KPAAAKPKAAPKQPPAEDVEPAVKAALDAFGGTLQKL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcttatgtagcactataccggcgctggcggccgcagggcttcgatgcccttgtaggt
caggacgcagtgaggatcgcattgagcaatgctttgacgacaggacggattgcgcatgcg
tatttatttgccggtccaagaggtacaggcaagaccagtacggcgaagattctggcgaaa
gctctgaattgcgagcaggggcctactgctaatccctgtaacgagtgcgccaactgccag
cggatcaatgacggcagcagtatggatgtgtttgagatcgacgctgcctctaaccgcggt
atcgatgagatccgtgacctgcgtgaaaaagtcatgtttgcgcctgtcaacgggcgttat
aaagtatatattatcgatgaagtgcatatgctgacgacagaagcttttaacgcgctgctg
aaaacgttggaagagccgccggcgcatatcgtgtttattttggcgacgacagagccgcat
aagataccggcaacgatccattcccgctgtcagcgttttgattttaaacgtgtgactaat
gaggatattgccaaacgtctgcgcgaggttgctgacggcagcgaaatcagagcggatgac
gaagccttgaaactgattgcgattcagtcggacggaggtatgcgtgatgcgctgagcctg
ttggatcagtgcggcgtgatggccgatactgtaactgccgaaacggtacggaacgtttta
ggtatcgtggggcgtgaagcgctgcgtgagctggtgcgtgcgatcggcaggcaggacttg
tcagctgctttgcagctgctgaaccgtttggctgagcagggcaaggatgtgcgtcagatc
ctgacagagctggccgagtatctgcgggcggtgctgctctataaagcatcgcccggatac
cacgaaatttatttgacggatacggaagaagctatttctgagctggctccgttatttggc
agtgatcgcctgatggcggctgaagaacgtctgcatcaggccatgggtgaattgcggttc
agtgcgcggggcaggattactgcggaattatgtctgtttgatctgtgccgtattgagggc
agtactattgccgcactgatggcccgcgtagagcagctggagcatcaggtacgcagcggt
gtgcctttgggtgctgcaaacagcaggactcagattaagcctgaacccgaagaaaaacag
gcagcggcggttgctgctcctgcagcgtcccgggtaaaaaaagcgccggcagtaagtgcc
gttcaggcaccagcggcggaacccgagcctgctgctgcggtaaaagctgaaacagagccg
aaacctgtttctgaggaagcagctgctgcgacgacactggaatacagcggtgactggacc
gaaggcgaagatctgtggaaccaggctttggagatccttaagaatgagaaaaaacagtct
atggtggcctgtgccgccggcggttatgttacagggtatgaaaacggcgttttgaccgtt
ggtttcaaaaataaattcatgtgcgtcaggatgaacgatcctgattataagaaagctttt
gaagaagtgctgctgaggctggcacggcaaagtgtacggttggaatgcatcactgccgcc
aagcctgccgctgccaaacctaaagctgctccaaaacagcctccggcggaagatgttgaa
cctgctgtgaaggctgcgctggacgcttttggcggcacactgcaaaaattataa
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