Phascolarctobacterium faecium: PFJ30894_00244
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Entry
PFJ30894_00244 CDS
T05784
Symbol
pgdS_1
Name
(GenBank) Gamma-DL-glutamyl hydrolase precursor
KO
K13694
murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.-
3.4.17.13
]
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pfac01002
]
PFJ30894_00244 (pgdS_1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pfac01011
]
PFJ30894_00244 (pgdS_1)
Enzymes [BR:
pfac01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.13 muramoyltetrapeptide carboxypeptidase
PFJ30894_00244 (pgdS_1)
Peptidases and inhibitors [BR:
pfac01002
]
Cysteine peptidases
Family C40
PFJ30894_00244 (pgdS_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
pfac01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
PFJ30894_00244 (pgdS_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
PG_binding_1
PepSY_2
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
BBG62631
LinkDB
All DBs
Position
complement(267808..268494)
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AA seq
228 aa
AA seq
DB search
MVMRKMTALLTFVLIICLLPAAAFAKTFKEGDKDWKIMVTQQKLKTLGYATDRTDGKFSK
ATADSLKNFQKKHKLKANGRLDDKTYKKVTWEAFKKEGITNVKGRDVVKTASKYKGTPYK
FGGTTPKGFDCSAYVQYVFGKHRAQLPRTADVQVLEGVFVLKNQLKEGDLVFFSTYEPGA
SHVGIYAGKGMFWNASTSRGVVLDSLDNTYWKSHYYGARRILVDNGEV
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgaggaaaatgaccgcattgctgacctttgtgctgataatctgtctgctgcct
gccgcagcttttgccaaaacctttaaagagggtgacaaggactggaaaatcatggtcact
cagcagaagctgaaaactttgggatatgctactgaccgtaccgacggtaagttcagtaaa
gcaactgccgacagtttgaaaaactttcagaaaaagcataaactgaaagcgaatggacgc
ctggacgataaaacctataaaaaggtcacatgggaagcctttaaaaaggaaggaattacc
aatgtcaagggcagggatgtcgtgaaaacggcttctaaatataaaggtactccttataaa
tttggagggacaacgcctaaaggctttgactgctcggcctatgtgcagtatgtttttggc
aagcacagggcgcagctgccgcgtactgcggatgtgcaggtcttagagggtgtttttgtc
cttaaaaaccagctgaaggaaggcgatctggtctttttctcgacttatgagccgggcgca
tctcatgttggaatttatgccggaaaaggcatgttctggaatgcatcgacgtctcgcggc
gtagtactcgattcactggacaatacttattggaaatcccattattacggggcgcgccgt
attcttgtcgataacggtgaagtgtaa
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