Phascolarctobacterium faecium: PFJ30894_00487
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Entry
PFJ30894_00487 CDS
T05784
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfac03400
]
PFJ30894_00487 (sbcC)
DNA repair and recombination proteins [BR:
pfac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PFJ30894_00487 (sbcC)
Archaeal homologous recombinant proteins
PFJ30894_00487 (sbcC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_27
AAA_21
AAA_15
AAA_18
AAA_16
nSTAND3
ABC_tran
GTP_EFTU
LptF_LptG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBG62864
LinkDB
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Position
complement(495706..498030)
Genome browser
AA seq
774 aa
AA seq
DB search
MKPLQLTMQAFGAYAGEQIIDFTLLGDKNFFLIHGPTGSGKTTILDAISFALYGSASGDL
RESKNLRSDYAPAEQKTEVEFTFKSGEYIYQVLRSPEQELKKQRGEGTRKVPAAAALFKI
LTDGSKEPLAAKSDEVTKKITELIGFKAEQFRQIVLLPQGEFRRFLIAESKDRKAILETI
FKTELYRRIEALLAERSTAIDNDYKALKQQQQFILNSTECENNDQLLADIQIFLQRQKEE
TAALQTASAQLAAAKLQLQQAQELHNAFAEATAARTAFLTLTEQRSAVETAKTEAAQADK
AALLEEIYNSTLRAHKHNQECLSAEQSAQQATAAAQAKLQELHQKLSEQLQQLDGQSIKD
TANLDKALELLNQRILQLHSEAAKLSGVTSELERLAAALVDNEPCPVCGALQHPHPATIT
AAQKSELQLKTQTITRQVQSLQLLQQSYQQAQLHLAGCEATLKANQAASVNAAKEFSALR
EHFKERLDASDFESQTAFLAALRTESTRKQLQQTIAAYEQNLAAATDRLQRAQNAVNGKT
EPELSACKAAEQQADALYRQLTAQTAVTAKELSDLQKAQLQLQELEKKMGTLQDAYQTAA
SLAETARGNNPSRLTFSAFVLQAILDDVLQAANLRLTSMSRGRYSLSRTGDVLDARRENG
LNIEVTDSFTGVARPVKTLSGGELFLASLSLALGLSDVVQAYAGGIRLDTILVDEGFGTL
DSEALDMAIRTLTDLQKGGRLVGIISHVSELRERISARLEVIPGQRGSTAVFHV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattacaacttaccatgcaggcctttggtgcttatgccggtgagcaaattatt
gacttcacgcttttaggagataaaaactttttcctgatccacggaccgaccggttccggt
aaaactactattttagatgcgatcagcttcgctttatacggcagcgccagcggcgatctg
cgcgaaagtaaaaacctgcgcagcgactacgctcccgccgaacaaaaaaccgaagtagaa
tttacctttaaaagcggggaatatatctatcaggtactgagatctcccgagcaggaatta
aaaaagcaacgcggcgagggcactcgaaaggtaccggcagccgccgccctttttaaaatc
cttactgacggcagcaaggaaccgctggccgcaaaaagtgacgaagtgaccaaaaaaatt
acagaacttattgggtttaaagcggaacagttccgtcaaatagttttgttgccccaggga
gaattccgacggtttctgatcgctgaatcgaaagaccgcaaggcgattctggaaacgatc
ttcaaaaccgagctgtaccggcgtatcgaagcactgctggcagaacgcagcactgctatc
gacaacgattataaagcacttaaacaacaacaacagtttattttgaacagtaccgaatgt
gaaaacaacgaccagcttcttgctgacatacaaatatttctgcagcggcaaaaggaagaa
acggctgcactgcagactgcttccgcacagcttgcagcagcaaaactgcaattgcagcag
gctcaggagctgcataatgcttttgcggaagcaactgcagcacgaacggctttcttaact
ttgacagaacagcgcagcgctgttgaaactgcaaaaactgaagcagcacaggctgataaa
gccgcactgctggaagaaatttacaactctaccctgcgcgcacataaacacaaccaggaa
tgtctgtcagccgaacaaagcgctcaacaggcaacagcagcggcgcaagcaaagctgcag
gaactgcaccaaaagctttcagaacaattacaacagcttgacggtcaaagtatcaaggat
actgcgaacctggataaagcgctggagcttttgaaccagcggatcctgcagctccacagc
gaagccgctaaattatccggtgtcacttctgaattagaacgtctggccgcggctctcgtt
gacaatgaaccgtgtcctgtctgcggagctttgcagcatccgcacccggctacaataact
gcggcccagaaatctgagctgcagttgaaaacacagacgattaccagacaggtccagagc
ttacagctgctgcagcaaagctatcagcaggctcagctgcatctggcaggctgcgaagct
actctgaaagcaaaccaggcggcttctgtaaatgctgccaaagaattcagcgctctgcgc
gaacattttaaagaacgcctggacgcttcagactttgaatcacagacagcctttcttgcc
gctttgcgtactgaaagtacgcgaaaacaactgcagcagaccatcgccgcctatgaacaa
aatctggccgcagcaacagaccgcctgcaacgcgctcaaaatgccgtcaacggtaagacc
gagccagaactcagtgcctgcaaagcagcggaacagcaggcagacgctctctaccgtcag
ctgacagctcaaacggcagtaaccgccaaagagctttctgatctgcaaaaagcacagctc
cagctgcaggaattggaaaaaaagatgggcactttacaggatgcctatcaaacagcagcc
tctctggcagaaaccgcaagaggcaataatccctcaagacttaccttttccgcatttgtt
ttgcaggctattttagacgacgtactgcaggccgccaatctgcgtttaacctctatgagc
cgtggccgttacagtttatcacgtaccggtgatgttctggatgccagaagggaaaacggt
ttgaacattgaagttaccgacagctttacaggcgttgcccgtcctgtcaaaacacttagc
ggcggagaactgtttctggcttcactctcgctggccttagggctttccgatgtagtacag
gcctatgcgggaggtatccgccttgataccattctggtcgatgaaggttttggcacgctt
gactccgaagccctggatatggctatccgcacgcttaccgatctgcagaaaggcgggcgt
ctggtaggaatcatttcccacgtcagcgagctgcgcgaacgcatttcagcccgattggaa
gtaatccccggccaacgtggcagtactgctgtttttcacgtctaa
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