Phascolarctobacterium faecium: PFJ30894_00551
Help
Entry
PFJ30894_00551 CDS
T05784
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac00300
Lysine biosynthesis
pfac00470
D-Amino acid metabolism
pfac01100
Metabolic pathways
pfac01110
Biosynthesis of secondary metabolites
pfac01120
Microbial metabolism in diverse environments
pfac01230
Biosynthesis of amino acids
Module
pfac_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFJ30894_00551 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFJ30894_00551 (lysA)
Enzymes [BR:
pfac01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PFJ30894_00551 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BBG62928
LinkDB
All DBs
Position
558781..560043
Genome browser
AA seq
420 aa
AA seq
DB search
MSKKPFVSKEKLDEIAAQYATPFYLYDEAAIRETARRVNKAFAWNQGFKEYFAVKATPNP
AILKILHEEGCGADCSSYTELQMADAVGFKGDEIMFSSNATPAEDFQLARQLNVTINLDD
ITHIDFLEKVADIPDTVSCRYNPGGHFAIANNIMDNPGDAKYGMTREQMTEAYKILLSKG
VKHFGMHAFLASNTVTNDYYPELARILFQVAVELKEETGAHIEFINLSGGVGIPYRPDQE
GNDIMVIGEGVRQAFEDILVPAGMGDVKIFTEMGRYMLAPYGALVAKAIHVKHTYKEYIG
LDACAANLMRPAMYGSYHHITVMGKEDAPCDHKYDITGGLCENNDKFAIDRMLPEINIGD
LLFIHDAGAHGFAMGYNYNGKLRSAEVLLKEDGSTELIRRAETPADYFATFDFTGLFKNI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaccctttgtaagtaaagaaaaattagatgagatcgccgcacagtatgca
acgccgttttatttatatgatgaagcggctattcgtgaaactgcgcgtcgtgtgaataag
gcgtttgcctggaatcagggttttaaagaatattttgccgttaaagctacccctaacccg
gcaatattgaaaatattgcatgaggaaggctgcggtgcggattgttcttcgtatacggaa
ctgcagatggccgatgccgttggttttaaaggcgatgaaattatgttttcgtccaatgca
acgccggcagaagattttcagctggcaaggcaattgaatgtcactatcaatctggatgat
atcactcatatcgactttctggaaaaagttgctgatatcccggatacggtcagctgccgt
tacaatccaggcgggcattttgccattgccaacaatattatggataatcccggtgacgcc
aaatatggtatgaccagagagcagatgacagaagcttataaaattcttttaagcaagggt
gttaaacattttggaatgcacgcttttctggccagcaatactgtgactaatgattattat
ccggaactggcacggatattgttccaggtcgctgtggaattgaaggaagagacaggagcg
catattgagttcatcaatctgtccggcggtgtcggtataccttatcgtcccgatcaggag
ggcaatgatattatggttatcggcgaaggcgtacgtcaggcttttgaggatatcctggtg
cctgcaggaatgggagacgtaaaaatttttacagagatgggccgttatatgctggctccc
tatggggcgcttgttgctaaagccatccacgttaaacatacctataaagagtatatcgga
ctggatgcctgcgcggctaatctgatgcgtccagccatgtacgggtcctatcatcacatt
accgtaatgggtaaggaggatgcgccctgcgatcataaatatgatattaccggcggtttg
tgcgagaataacgacaaatttgctatcgacaggatgctgccggaaatcaatatcggtgat
ctgctctttattcatgatgcgggagcacatggttttgccatgggctacaattataatggt
aaactgcgcagtgcggaagtgctgctgaaggaggacggcagtacggaattgattcgccgt
gcggagactccggcagattactttgccacttttgattttacaggattatttaaaaatata
tag
DBGET
integrated database retrieval system