Phascolarctobacterium faecium: PFJ30894_00917
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Entry
PFJ30894_00917 CDS
T05784
Symbol
gcdB_2
Name
(GenBank) Glutaconyl-CoA decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac00362
Benzoate degradation
pfac00620
Pyruvate metabolism
pfac00650
Butanoate metabolism
pfac01100
Metabolic pathways
pfac01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
PFJ30894_00917 (gcdB_2)
00650 Butanoate metabolism
PFJ30894_00917 (gcdB_2)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PFJ30894_00917 (gcdB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfac02000
]
PFJ30894_00917 (gcdB_2)
Enzymes [BR:
pfac01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
PFJ30894_00917 (gcdB_2)
Transporters [BR:
pfac02000
]
Other transporters
Primary active transporters [TC:
3
]
PFJ30894_00917 (gcdB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
BBG63290
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All DBs
Position
920906..922036
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AA seq
376 aa
AA seq
DB search
MEAFVVALQSVWNDSGFSAFTMGHAIMMLVGIILLYLAIGKGFEPLLLSPIAFGCLLANV
PKTGFEDQPGVMQVILYGINHEIFPPLIFLGVGAMTDFGPLIANPKTLLLGAAAQAGVFV
SLLGAMMLGFTVQEASAIGIIGGADGPTAIYLAAKMAPNLLGAIAVAAYSYMSLVPLIQP
PIMKLCTTEADRKIVMEQLRPVSHFERIVFPVVTTIVISLLLPPVCSLIGMLMLGNLFKE
AGCLDRLSDTAQNALMNIVTIMLATGTGLTMKAESFLNYQTILIIVLGLIAFAAGTFAGV
VFGKLMCILDGGKTNPLIGSAGVSAVPMAARVSQIVGQKANPANFLLMHAMGPNVAGVIG
TAVAAGAMLAMIGPVK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatttgtagttgctttacaatccgtatggaatgacagcggtttctccgctttc
accatgggtcatgccatcatgatgttggtaggtattattcttttatatttggctattggt
aaaggttttgaacctttgctgttgtctccgattgcattcggctgtttgctggcaaacgtg
cctaaaacaggttttgaagaccaaccgggtgttatgcaggtaattctttatggtattaat
catgaaattttcccgcctttgattttcttaggcgtaggtgcaatgacagactttggtccg
ttgattgcaaacccgaaaactttgcttttgggcgctgcagctcaagcaggtgtatttgtt
tccttgctgggcgctatgatgctcggatttacagtgcaagaagcatccgctatcggtatt
atcggtggtgctgatggcccgactgctatttacctggctgcaaaaatggctcctaacctg
ttaggtgctatcgcagtagctgcatattcttatatgtcgttggttcctttgatccaacct
cctattatgaaactttgcactactgaagctgaccgtaaaatcgttatggaacaactgcgt
ccggtttctcattttgaaagaatcgtattcccggttgttactactatcgttatcagcttg
ttgcttccgcctgtatgctctttgattggtatgctgatgttgggtaacctgttcaaagaa
gctggttgtttggatcgtctttccgatactgcacaaaatgctttgatgaacattgtaacg
atcatgctggcaactggtacaggtttgactatgaaagctgaatccttcctgaactatcaa
actattttgatcattgttcttggtttgatcgctttcgcagctggtacttttgccggtgtt
gtatttggtaagctcatgtgcattctggatggtggtaaaaccaatcctcttatcggttcc
gctggtgtatccgcagttccgatggcagcacgtgtatcccaaatcgttggtcaaaaagct
aaccctgctaacttcctgctcatgcatgctatgggcccgaacgtagctggtgttatcggt
accgcagtagctgcaggtgcaatgcttgcaatgattggacctgtcaaataa
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