Phascolarctobacterium faecium: PFJ30894_01025
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Entry
PFJ30894_01025 CDS
T05784
Name
(GenBank) hypothetical protein
KO
K04485
DNA repair protein RadA/Sms
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfac03400
]
PFJ30894_01025
DNA repair and recombination proteins [BR:
pfac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PFJ30894_01025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
Lon_C
DUF7125
Rad51
AAA_22
AAA
AAA_16
DUF7129
GvpD_bR2
AAA_24
nSTAND3
Isochorismatase
RUBY_RBDX
HypA
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-ProteinID:
BBG63398
LinkDB
All DBs
Position
1042130..1043488
Genome browser
AA seq
452 aa
AA seq
DB search
MAKPKIRFVCQSCGYVTAKWLGKCPECGQWDSFVEEMDVPERPGQSYLPVGETAKPKPLH
QVAEQSLSRLQTGIREFDRVLGGGIVPGSLVLLGGDPGIGKSTMLLDAGMKFSRNNIKVL
YVSGEESEAQTAMRARRLGSSGENLLVMTATDLNIILLQAQEVQPALLVIDSIQTMYNSE
LPTAAGSVGQVRECTAKLLRFAKTSGIAVLIIGHVTKDGNIAGPRLLEHMVDVVLQFEGD
RSYSFRVLRALKNRFGSTNESGIFSMEASGLQEISNPAGLFLEERSNDASGSVVCACLEG
NRPILVEVQALVAKTPYGMPRRTAVGFDYNRVTMLLAILERRLGMDFGAYDAYVNVVGGM
RVTEPAADLAVAAALVSSYRNRPIPHGVLVMGEVGLTGEVRRIGSPERRIKDAMNLGFKR
FVLPMGKLSLDEPCNGIVQVKTLEEALDKVFA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccgaaaatacgtttcgtttgtcagtcgtgtggttatgtaacggctaaatgg
ttgggaaagtgtccggaatgtggtcaatgggacagctttgtcgaagaaatggacgtgcct
gaacgtcctggacagagttacctgcctgtaggcgaaaccgctaagcccaaaccgttgcat
caggtggcggaacagtccctcagtcgtctgcagacaggtatccgtgaatttgatcgtgtg
cttgggggagggattgttcccggcagcctggttttgttgggcggagacccgggcattggc
aagtcgactatgcttttggatgccggcatgaagtttagccggaataatataaaagttttg
tatgtttctggtgaagaatcagaagcgcaaacagcaatgcgggcgagacgtttaggcagc
agcggtgaaaacctgctggtgatgacggctaccgatttgaatattattttactgcaggca
caggaagtgcagccggcattgttggtaattgattctattcagactatgtacaacagcgag
ctgcctactgcagccggcagtgtcggacaggtgcgcgagtgtacggcgaaattgctgcgt
tttgcaaaaaccagcggcattgccgtgcttattatcggtcatgtgactaaagacggtaat
attgctggcccacgattgcttgaacatatggtcgacgtggtgctgcaatttgaaggggat
agatcctattcttttcgggtgctgcgtgccttgaaaaaccgttttggctctacaaatgaa
agcggtattttttctatggaagccagtgggctgcaggaaataagtaatccagcaggatta
ttcctggaagaacgcagtaacgatgcttccggttcagttgtttgtgcttgcctggaaggt
aacaggcctattttagttgaagtgcaggctttggttgccaaaacaccttatgggatgccc
cgacgcactgctgttggatttgattataatcgggtcactatgcttttggcgattttggaa
cggcgcttaggaatggattttggcgcttacgatgcttacgtcaatgtggttggcgggatg
agagtcactgaaccagctgcagatctggctgtggctgctgcgctggtgtccagttatcgt
aatcggccgattccgcatggcgtattagtcatgggtgaagtggggcttacaggagaagtg
cgacgaataggttcgccggaaaggcgtatcaaagatgctatgaatcttggctttaaaaga
tttgttttgccaatgggcaagctgtcattggatgaaccctgcaatggtattgtgcaggtt
aaaactttggaagaagcgctggataaggtttttgcttaa
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