Phascolarctobacterium faecium: PFJ30894_01113
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Entry
PFJ30894_01113 CDS
T05784
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfac03016
]
PFJ30894_01113 (truA)
Enzymes [BR:
pfac01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PFJ30894_01113 (truA)
Transfer RNA biogenesis [BR:
pfac03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PFJ30894_01113 (truA)
Prokaryotic type
PFJ30894_01113 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBG63481
LinkDB
All DBs
Position
1115431..1116207
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AA seq
258 aa
AA seq
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MRTLKLTVAYDGTNYHGFQKQTNALTVQQVLEEKLSLLCGEKIVTAGSGRTDTGVHARGQ
VVSLTTSGSIPLENLLKACAGILPKDIVLWQAEEADEGFHARYSACWKRYCYRIVQNKHA
DPFLRNYVWQMREYLRLEAMQEAAQLLLGTHDFSFFRSAGSVQSSPVKTIYRAEWLPKEQ
GELEFCIEGNGFLYHMVRNIVWHLVEVGKGTKSIAAFKSEFAAGKRHFKVAPAPPQGLYL
DYVGYIPHFLADIEKIRK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactctgaaattaacagtggcttatgacggcactaattaccatggttttcagaag
cagactaatgctcttacagtgcagcaggtgcttgaagagaaactatccttgctctgcggc
gaaaaaatcgttacagccggttctggacgtactgatacgggtgtgcatgcacgggggcag
gtagtgtcgctgacaaccagcggtagtattccattggagaatcttttaaaggcctgtgca
ggaatcctgccgaaggatatcgtgctttggcaggctgaggaagctgacgaaggttttcat
gccagatacagcgcttgttggaaacgttattgttatcgcatagtgcagaataaacatgcg
gaccctttcctgcgtaactatgtctggcaaatgcgggaatatctgcggcttgaagcgatg
caggaggcagcacagctgcttttgggaacacatgatttttcgtttttccgttcggccggc
agtgtgcaaagttcgcctgttaaaacgatttaccgcgctgaatggctgccaaaagagcag
ggagaactggaattctgcattgaaggtaatggatttttatatcatatggtgcgtaatatc
gtctggcatctggtagaagtcggcaaaggcactaaaagtattgctgcatttaaaagtgaa
tttgcagcaggcaagcgtcattttaaggttgccccggcgcctcctcagggactttattta
gattatgttggttatataccgcattttctggcagatattgaaaaaatcagaaaataa
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