Phascolarctobacterium faecium: PFJ30894_01292
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Entry
PFJ30894_01292 CDS
T05784
Symbol
prn_6
Name
(GenBank) Pertactin autotransporter precursor
Organism
pfac
Phascolarctobacterium faecium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
BBG63659
LinkDB
All DBs
Position
1281925..1286133
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AA seq
1402 aa
AA seq
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MYLKTSNKKQLAAAVTLAVMGTAWVAVPGQVWAADGGSQDHPRQYSSYTADSDRAIAIAR
EQKTGEDMYAAQYHENFADLAFRAKDDMGGKTITLKSMTVEGIIGADGKGAAAGLPVEES
TAGKNGGIGSAVGIYSTNILNANITFGDIAIKAIGGNTYSQEITSGKYTHEGKVGVDGAS
DKNLNGGAGANGGNGGLAIATGVDITGSNNTVTGGVLTVTATGSDGGHGGYGGVGGTAAA
ITTVPAKAGDGAQGVNGADSTTSGTTPSTAGANGTIGGAGGAGLAGADGTAGTVGAVGLT
GGIGGNGSNGGSGSNAEATGLKIAGSGTATTISLGGLVVEAAAGNGGAGGAGGAGGIGGV
GGTGGIGGNGGDGGDGGDGAQGGQGAQGAGGSNAHHSTGVGDNDVEGTVGGNGGNGGQGG
AAGAGGSGGIGGVGGIGGVGGTGGTGGHGGNGGVGGNATALGFAGTGSIINLAVAGNGIA
VTATGGDGAKAGIGGAGGIGGVGGNGGVGGDGGDYGDAGKGGHGGAGGAGGQGGILLNGT
IAVQGSQGVQGGEGAAAANGTVGTGGNAGQGGTGGTGGNAGNAGISQVGGSATSTALTFT
QSQVNLQTTAIKATAIAGKGVGSFESSKAYEAAGGTANVNNTGTEGNAGTTAVGQNGAVN
ATTNGGEGGKGITPIGTVAQSNNGAKAEAWGLVTSGGSLNVLSDSGLTISADAQEGSAYV
TAKAVVSANSVNVYQVQNDLKITATAVGDRDRTETVSEVEYTYSGSSTSTQATAVGLELT
GGSMVAEVGGTVTIEASTDWAGSNTATGIKAAEGAVIAVHSAGAMDISAEVVGTTTEGTK
LLKGANGILANGSTMYYAADNADITVSGGKHADDHAADIEGGVTTFDAGTGTVTFNGTAD
FTNGTLNLKSDTDVQTKENSLGSLDISGTAMNLTDNLAALTVEDKTTLAGSTVYFYDENN
QAEKYNTADYRTITTNDLDASDTNELFMRTNANGVYGQSAGNDKITSSNAVTGSGTYNIT
VFDQGMRNGYNNAAGADTKGHLDQDVVLIENADKGGTYNIKEMKYDNGVWSYEYEGKADI
VDDGLNLTQVTTRAATQSSAQMAAQDANKIAAGAAVTLFGADETLMERLGDVRNSADDND
SVWAKYVGGKIKVDGLQGDNDYQYNGFAAGYDREIGSNWRIGLAGQYAKGDTSLTNGDGE
IKTAAGALYGTWTGDKGHHVDIIAKVGKVDSETSAYGGTIAQKLDGDFGSTAISFAVEYG
YRQDLNDGWFVEPMVRASYVHLGGDDYTVTTRDNTMSVTNDSMNSIVLRGGFLLGKTFAA
DSSVYLKAAVLHDFDGDINTHVSADGRSASYSDSIGGTAIEYGIGVNHKFNKDSSMYLDV
ERISGGDVTKNWGVNVGFRYSF
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
gtgtatttaaaaacaagtaataaaaaacagctggcagcagcagtaacgctggctgtaatg
gggacggcgtgggtggctgtgccaggacaggtgtgggcagccgatggcggcagccaggat
catccgagacaatattccagctatacagctgatagtgatcgtgctattgcgattgcgaga
gagcaaaaaaccggtgaagatatgtacgccgcccaataccatgagaattttgctgatctg
gcctttcgtgccaaggacgatatgggcggtaaaactataactcttaaaagtatgactgta
gaaggtattatcggtgctgacggcaaaggcgctgcggctggattgccagttgaagaaagt
accgcaggcaaaaatggcggtatcggttctgctgtaggtatttattctactaatatctta
aacgccaatattacctttggtgatattgcaattaaagccattggcggcaatacttattcc
caggaaatcacttccggcaaatatacccatgaaggtaaagtgggtgtcgatggggcaagt
gataaaaacttaaatggcggcgccggtgctaatggcggcaacggcggacttgccatagct
accggtgttgacattacaggcagcaataatactgttaccggcggcgttttgactgtgact
gctacaggcagtgacggcggccacggcggttacggcggcgtaggtggtactgcggcagca
ataacaactgttcccgctaaagcaggtgacggcgcacagggcgttaatggagctgacagt
actacttcgggcacaactcctagtactgccggagctaatggcactataggcggtgctggc
ggtgctggcctggctggtgctgacggtactgctggcactgtgggagctgttggccttaca
ggcggcattggtggtaacggtagtaatggcggcagcggtagtaacgctgaagcgacagga
ctgaaaattgcgggcagcggcacggcgactacgatcagcttaggcgggcttgttgttgaa
gctgcggctggtaatggcggagctggtggtgcaggtggcgccggtggtatcggcggcgta
ggcggaaccggtggtatcggcgggaacggtggcgatggcggtgatggcggcgacggtgct
cagggcggtcaaggtgctcagggtgctggtggcagtaatgcccatcatagtacaggtgtt
ggcgataatgatgtagaaggtactgtcggtggtaacggcggtaacggcggccagggtggt
gcggccggagcaggcggcagtggcggtatcggcggtgttggtggtatcggcggcgttggt
ggaactggcggaactggtggccacggtggtaatggcggtgttggcggtaatgcaactgcg
ctggggtttgccgggactggcagtattatcaatcttgctgtagcaggcaatggcattgca
gttactgcaaccggtggcgacggcgctaaagcaggtatcggtggcgcaggtggcattggc
ggtgttggtggcaacggaggcgttggcggtgacggcggcgactatggcgacgctggtaaa
ggtggacatggcggcgctggtggtgctggcggccagggcggtattttattaaatggaacc
attgctgttcagggttcgcaaggtgttcagggcggtgaaggtgccgctgctgctaacggt
actgtaggcacaggcggcaatgcaggccagggcggcaccggtggtactggtggcaacgca
ggtaatgctggtataagtcaagttggcggcagtgcaacttccacagctttgacctttacg
caatcgcaggtcaatctgcaaacgactgctattaaagctactgctatagccggtaaaggc
gtaggcagtttcgagagcagtaaagcttatgaggcagcaggcggcacagctaatgtaaat
aacaccggtacagagggtaacgcaggaacaactgctgttggacaaaatggcgctgtcaat
gcaactactaacggcggtgaaggcggcaaaggcatcactcctatcggtacagtggctcaa
agtaataacggtgctaaagctgaagcctggggacttgttaccagcggcggttctttgaac
gtgctttctgatagtggactgactatcagcgcagatgcgcaagaaggttctgcttatgtt
actgccaaagcagttgtgtctgcaaattcagttaatgtgtaccaagttcaaaatgattta
aaaatcactgcaacagcagttggcgatcgagacagaacagaaacagttagtgaagttgaa
tatacgtattcgggctccagtacatccactcaagctacggctgttgggctggaactgaca
ggcggcagtatggtggctgaagttggaggcaccgtgactatagaggcaagtaccgactgg
gcaggttctaatactgctacaggcatcaaagctgctgaaggtgcggttattgctgttcat
agtgccggggctatggatatcagtgccgaggtagttggtactactactgaaggaactaag
ctcctcaaaggcgccaatggtattttggcaaacggcagcacaatgtattatgctgcagat
aatgctgatatcactgtcagcggtggtaagcatgcagatgaccatgcggcagacattgaa
ggtggggtaactacttttgatgccggtacgggaaccgttacctttaacggcactgctgac
ttcacaaacggcactttgaatctgaaatctgatacagacgtacagacgaaggagaatagt
cttggttctctcgatatcagcggtactgccatgaacctgacagataatctggcagccttg
actgtagaggataagactactcttgctggcagtacggtctacttctatgacgaaaataat
caggcagagaaatacaatactgctgattaccgtactatcactactaatgatctggatgct
tccgatactaacgagctctttatgcgtaccaatgccaacggcgtttacggtcagtcggca
ggcaacgacaaaattacttccagtaatgctgtaaccggcagcggtacctataatatcact
gtttttgaccaggggatgcgcaacggctataacaatgctgccggcgctgatactaaggga
catttggaccaagatgtcgtactgatcgaaaatgcagataaaggcggcacctacaacatc
aaagaaatgaaatatgataacggcgtctggtcttatgaatatgaggggaaagcagacatt
gtcgatgatggtctgaacctgacacaggtcactaccagggctgcaactcaatcctctgcc
caaatggcggctcaggatgccaacaagatcgcagccggagcggcagtgactctgttcggc
gctgatgaaactttgatggaacgtctgggcgacgtccgtaattctgcagacgataacgac
agcgtttgggctaaatatgtcggcggcaaaatcaaagtagatggactgcagggagataac
gattatcaatataacggctttgcggcaggttatgaccgtgagatcggcagtaactggcgt
atcggcctggcaggacaatatgctaaaggcgataccagcctgactaatggcgacggtgaa
atcaaaaccgcggcaggcgctttatatggcacatggactggcgataaaggtcatcatgta
gacatcattgccaaagttggtaaagttgacagtgaaaccagcgcttacggcggcactatt
gcccaaaaactggacggtgattttggcagtacagctataagctttgctgttgaatacggc
tatcgtcaggatttgaatgacggctggttcgttgaacctatggtgcgtgcaagctacgta
catctgggcggcgatgattataccgtaaccactcgcgacaatactatgagcgttactaac
gacagcatgaacagcattgttctgcgcggcggcttcctgctgggcaaaacctttgcggca
gacagcagcgtttatctgaaagcggcagtactgcacgatttcgacggcgacatcaataca
catgtcagcgctgacggcagaagcgccagctacagtgacagcatcggcggtaccgccatc
gaatatggtatcggcgtcaaccacaaatttaataaggattccagtatgtatctggatgta
gaacgtatcagcggcggcgacgtaactaaaaactggggcgtcaatgtcggcttccgttac
agcttctaa
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