Phascolarctobacterium faecium: PFJ30894_01313
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Entry
PFJ30894_01313 CDS
T05784
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFJ30894_01313 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfac03019
]
PFJ30894_01313 (recQ)
03400 DNA repair and recombination proteins [BR:
pfac03400
]
PFJ30894_01313 (recQ)
Enzymes [BR:
pfac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PFJ30894_01313 (recQ)
Messenger RNA biogenesis [BR:
pfac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PFJ30894_01313 (recQ)
DNA repair and recombination proteins [BR:
pfac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PFJ30894_01313 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBG63680
LinkDB
All DBs
Position
1305584..1306807
Genome browser
AA seq
407 aa
AA seq
DB search
MQTKEMILQKYFGYSEFRSGQSELIEQILNGRPVVAVMPTGAGKSLCYQLPALMLEGLTL
VVSPLISLMKDQVRSLAEHGVEAAYLSSGMSKQEYGAAVYAARNNKCKLLYVSPERLQNE
QFKAFASELQIALVVVDEAHCVVRWGESFRPAYLAIKPFLDGLPKAPVVAAFTATATPVV
RREISKCLGLEQPLELVTGFDRSNLTFIVEKPMVKRRFLRSWLPEQNGCGIIYCATQKQT
EEVCNDLNAWGYPAGRYHAGLTMEERQRNQNAFIKNELQVMVATNAFGMGIDKPDVRFVL
HYTLPLDVEGYYQEAGRAGRDGLPAKCVLLFERRDIMQQRQLLEYSCEQRESSAEDKKLW
LTNAYQRLRDIESYCFTRGCLRKYLLTYFGQETNDRCGNCSNCSGSN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacaaaagaaatgattttgcaaaaatattttggttacagtgagttcagaagcggg
cagtcagagctgatagagcaaattttgaacggacgtcctgttgtagctgttatgccgacc
ggagctggaaaaagcttatgttatcagttaccggcgttgatgctggagggattgacactg
gttgtttcaccgttgatttccttgatgaaggatcaggtacgcagtttagcggaacatggt
gtagaagcggcttatttgagcagcgggatgagtaagcaggagtacggtgccgccgtttat
gctgcccgtaataataaatgtaaattgctgtacgtttcacctgaacgcctgcagaatgag
cagtttaaggcttttgcaagtgagctgcaaatagcgttggtcgttgttgatgaagcacac
tgcgtagtacgatggggtgaatccttccgaccggcttatctggcaataaagccgttttta
gacggcctgccgaaggctcctgttgttgcggcttttacagctactgccacgccggttgta
agacgtgagataagtaaatgtctgggattagagcagccgttagaactggtgaccggtttt
gacagaagcaatcttacatttattgtggaaaaaccaatggtgaaaagacgttttttgcgt
agctggctgccggagcaaaacggctgcggtattatttattgtgcaacgcagaagcagacg
gaagaagtatgtaatgacctcaatgcctggggctatcccgcaggacgttatcatgctggt
ttaacaatggaagaacggcagcggaaccagaacgctttcattaaaaatgaattgcaggtg
atggtggcgactaatgcgtttgggatgggtatagataaacctgatgtaaggtttgtcttg
cattatactttgccgcttgatgtagaaggctattatcaggaagcaggaagggctggacgt
gacggcttgccggcaaaatgcgtactgctttttgaacggcgtgacataatgcagcagcgg
cagctgctggaatatagctgtgagcagagagaaagcagtgcggaagacaaaaagctgtgg
ctgacaaatgcttaccaaaggctgcgtgatatagaaagctattgttttaccagaggttgc
ctgcgtaaatatctgctgacatattttggacaggaaacaaatgacagatgtgggaattgc
agtaattgcagcggcagtaattga
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