Phascolarctobacterium faecium: PFJ30894_01343
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Entry
PFJ30894_01343 CDS
T05784
Symbol
ccpN
Name
(GenBank) Transcriptional repressor CcpN
KO
K23774
DeoR family transcriptional regulator, catabolite repression regulator
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfac03000
]
PFJ30894_01343 (ccpN)
Transcription factors [BR:
pfac03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
PFJ30894_01343 (ccpN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBS
HTH_11
HTH_DeoR
HTH_PafC
HTH_Mga
GntR
IF3_N
MarR_2
Polysacc_synt_3
Motif
Other DBs
NCBI-ProteinID:
BBG63710
LinkDB
All DBs
Position
1338291..1338953
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AA seq
220 aa
AA seq
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MRTISLSNRQKRIAEIVRQDGPITGEHIAERLNVTRAALRSDLAILVMGGILDARPKVGY
YFTGKNTLGMLMEEISGILVRDLQSVPVAVNQDKSAYEAVVTMFLEDVGTVFVLDEAGLL
VGVVSRKDLLKAAINNGSDLREIPVVMVMTPLSKLIVVKQEDSVASAARKIIDNEIDCLP
VIRCVGEDKRSYEVVGRITKTNFTRLLVDLAEGKGGNYHS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgaggacaatttctttaagtaacagacaaaaacgtattgccgagatcgtgcgccaggat
gggccgatcacgggcgaacatattgctgaacgtctgaatgtaactcgtgcggctttacga
tcagatctggcgattttagttatgggcggtattttagatgcgcgtcctaaagttggttat
tattttaccggcaagaatacgctgggaatgttgatggaagaaatttccggcatccttgta
cgtgatctgcagtctgtgcctgtagcagtcaatcaggataaaagcgcctatgaagctgtt
gtaactatgttcctggaggatgtagggacagtatttgttcttgatgaggctggccttttg
gtaggggtggtatcgcgtaaagacttgcttaaagctgctatcaataatggcagcgatctg
cgtgaaattcctgttgtaatggtgatgacaccactgtctaaacttattgtagtcaaacag
gaagattctgtagcttcggcagcacgtaaaattattgataatgagattgattgtctgcct
gttattagatgtgtgggcgaggataagcgcagttacgaagtagtgggacgtatcactaaa
acgaattttacccgtctgttagtggatctggcagagggcaaaggaggcaattatcatagc
taa
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