Phascolarctobacterium faecium: PFJ30894_01348
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Entry
PFJ30894_01348 CDS
T05784
Symbol
sigA_2
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PFJ30894_01348 (sigA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfac03021
]
PFJ30894_01348 (sigA_2)
Transcription machinery [BR:
pfac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFJ30894_01348 (sigA_2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
BBG63715
LinkDB
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Position
1343266..1344849
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AA seq
527 aa
AA seq
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MANTKISADQVEELLLKGKSHGGVLTYREIMDSMQNVEDMTPDDMDSMYELIAQKGIDVV
DENSDDDVLPVNDDDTEEINEAELANLSVPEGVSIDDPVRMYLKEIGRVPLLIGEDEIKL
AKRMDKGKQAERLMNSSLPAALVPAYSGKEKTATLIKKIKKHLEQEHKSCELRNVEKVLG
IIARAAAAGTPCTLSEYQDLIVEFTKDERLHLQRMMQEHNVMIPDCDKMVVDRQTSDKEV
HALFEIKTLLDEIKRRLPEENDAAVFDSYMTLEEDYGKLLEEVFEEGEAAKRCLSEANLR
LVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYNKGFKFSTYATWWIRQAITRAIAD
QARTIRIPVHMVETINKLIRVSRQLLQELGREPMPEEIAKEMDTTVDRVREIMKIAQEPV
SLETPIGEEEDSHLGDFIEDHDAPAPADAASFTLLREQLEEVLETLTVREKKVLELRFGL
EDGRSRTLEEVGQHFGVTRERIRQIEAKALRKLRHPSRSKRLKDFLE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggctaatactaaaatttctgccgaccaggtagaggaattattacttaaaggcaaatct
cacggcggtgttctcacttatcgtgaaattatggattctatgcaaaacgtagaagatatg
actccggacgatatggacagtatgtatgagttgattgcccaaaaaggcatcgacgtagtc
gacgaaaacagcgatgatgatgtactgccggtcaacgatgatgatacggaagaaatcaat
gaagcagagctggctaatctcagtgtgcctgaaggggtaagcattgatgatccggtcagg
atgtatcttaaggagatcggccgtgtaccgcttttgatcggcgaagatgaaatcaagctt
gctaaacgtatggataagggaaaacaggccgaaaggctgatgaattcgtcattgcctgca
gctttggttcctgcttacagcggtaaagaaaaaactgctactctgatcaaaaaaatcaag
aagcatttggaacaggaacataaaagctgtgaactgcgcaatgttgaaaaagtgcttgga
attattgcgagggcggctgcagcgggtactccctgtacattgtctgaatatcaggatctt
attgttgagtttactaaagatgagcgtttgcatttacaacgtatgatgcaggaacacaat
gtgatgatcccagactgtgataaaatggtagtcgatcgtcagaccagtgataaagaagta
catgcgctgtttgaaatcaagactttacttgacgagatcaagcgccgcttaccagaagaa
aatgatgctgctgtttttgatagctatatgacgttggaagaagattacggaaaacttttg
gaagaagtttttgaagaaggagaagccgcaaaacgatgtttatcggaagctaatcttcgt
ttggttgtcagcattgcaaaacgttatgttggccggggaatgctctttttagaccttatt
caggaaggtaaccttggtcttatcaaagcagtagaaaaatttgattataataaaggcttt
aaattcagtacttatgccacttggtggattcgtcaggctattacacgcgctattgctgac
caggcccgcaccattcgtatacctgtgcatatggttgaaacaatcaataaactgattcgc
gtatcacgtcaactgctgcaggaacttgggcgggaacctatgccggaagagattgcaaag
gaaatggatactactgttgatcgtgttcgtgagattatgaaaatcgcacaggaaccggta
tcattggaaactcctatcggtgaagaagaagattcgcatttgggggattttattgaagat
catgatgcaccggcaccagctgatgctgcttcgttcactttattgcgtgagcagttggaa
gaagtcttggaaacactgactgtgcgtgaaaagaaggttttagaactgcgttttggtttg
gaagacgggcgttcacgtaccctggaagaagtagggcagcattttggtgtaaccagagaa
cgtattcgtcaaatcgaggccaaagctttacgtaagctgcgtcatccaagccgcagtaaa
cggttaaaagacttcttggaataa
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