Phascolarctobacterium faecium: PFJ30894_01813
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Entry
PFJ30894_01813 CDS
T05784
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFJ30894_01813 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pfac01007
]
PFJ30894_01813 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pfac03016
]
PFJ30894_01813 (aspS)
03029 Mitochondrial biogenesis [BR:
pfac03029
]
PFJ30894_01813 (aspS)
Enzymes [BR:
pfac01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
PFJ30894_01813 (aspS)
Amino acid related enzymes [BR:
pfac01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PFJ30894_01813 (aspS)
Transfer RNA biogenesis [BR:
pfac03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PFJ30894_01813 (aspS)
Prokaryotic type
Other AARSs
PFJ30894_01813 (aspS)
Mitochondrial biogenesis [BR:
pfac03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
PFJ30894_01813 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BBG64170
LinkDB
All DBs
Position
complement(1845994..1847781)
Genome browser
AA seq
595 aa
AA seq
DB search
MSDSLKRSHSCGLLTKEAAGEQVVLCGWVAKRRDHGGLIFVDLRDRSGIVQIVVDPDDAG
NSFTTAEAIRSEYVIKVAGKVRLRDAATVNPNLATGEIEVVAADLEVLNAAKTPPFYIQD
DIDTDENLRLKYRYLDLRRPEMQKNLILRHKVTKLMRDYMDKNGFCEIETPMLTKSTPEG
ARDYLVPSRVNPGKFYALPQSPQIFKQILMVAGMERYFQIARCFRDEDLRADRQPEFTQL
DIEMSFVDAEDIMEMMEGLMAYVFEGAMGKKIQLPMQRLTWDEAMDRFGSDKPDLRFGME
LVNMSEAVKDSDFKVFNAIVEDGGVVKAINVKGYAAIPRRELDGLVEFVGIYGAKGLAWM
QIQEDGSVKSPIAKFFSEAHLANILKTAAAEPGDLILFVADKPAVVAQALGALRLEMAKR
RELIDEDMLAFAWVVDFPMFEYNDEEKRYVAMHHPFTAPRNEDLAMLATDPGKVYAKAYD
MVLNGTEIGGGSIRIHRRDVQNEVFKAIGLTEEQAKEKFGFMMDAFEYGAPPHGGLAFGL
DRLIMIMAKRDSIRDVIAFPKTQSASCLMTQAPNDVDEKQLRELHIRATLVKKDK
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattctttaaaacgcagtcatagctgcggtttgctgactaaagaggcagcaggc
gaacaagtagttttatgcggttgggttgccaaacgccgcgatcacggcgggttgattttc
gtcgatctgcgcgatcgcagcggtatcgttcaaattgtcgttgaccctgacgatgcaggc
aatagctttacgactgctgaagctattcgcagcgaatacgttatcaaagtagcaggtaaa
gtgcgtcttcgcgatgcagctaccgttaacccgaatcttgctaccggcgagatcgaagtg
gttgccgctgatttggaagtactcaatgctgctaaaactccgccgttttacattcaggac
gatatcgatacggatgagaacctgcgcttgaaataccgttatttggatttgcgccgtccg
gaaatgcagaagaatttgattttgcgtcataaagttactaaattgatgcgtgattatatg
gataaaaacggtttctgtgaaatcgaaacgccgatgctgactaaaagcactcctgaaggc
gcgcgtgactatctggtgccgagccgcgtcaatcctggtaaattctatgctttaccgcaa
tcaccgcagatttttaaacagatcttgatggttgccggtatggagcgttatttccagatc
gcacgctgcttccgcgatgaagatctgcgtgctgaccgtcagccggaatttactcagttg
gatattgaaatgtctttcgtagacgctgaggatattatggaaatgatggaaggcctgatg
gcgtatgtatttgaaggcgctatgggtaaaaagatccagctgccgatgcagcgtttgacc
tgggacgaagctatggaccgttttggcagcgataagccggacctgcgttttggtatggaa
cttgtcaatatgtctgaagcagttaaagattctgactttaaagtgttcaatgctatcgta
gaagacggcggtgtcgttaaagcgatcaacgttaaaggctatgccgctatcccgcgtcgt
gagctggacggtctggttgaattcgttggtatttatggtgccaaaggtctggcgtggatg
cagattcaggaagatggcagtgtcaaatcgccaatcgctaaattcttcagtgaagcacat
ttggcaaatatcctgaaaactgcagcggctgaaccgggcgatctgattttgttcgttgct
gataaaccggctgtagttgctcaggctttaggtgctctgcgtctggaaatggctaaacgc
cgcgaactgatcgacgaagatatgctggcatttgcctgggtcgtagatttcccgatgttt
gaatataacgatgaagaaaaacgctatgtggcaatgcatcatccgtttacggctccacgt
aacgaagatcttgctatgctggctaccgatcctggtaaagtatatgccaaagcttacgat
atggtacttaatggtacagaaatcggcggcggttccatccgtatccatcgtcgtgatgtc
caaaacgaagttttcaaggctatcggtcttaccgaagagcaggcaaaagagaaattcggc
tttatgatggatgcttttgaatatggtgctcctccgcacggcggtttggcctttggtctt
gaccgtttgatcatgattatggctaaacgtgattctatccgcgacgttattgctttcccg
aaaacacagagtgcaagctgtctgatgactcaggctccgaacgatgttgacgagaaacag
ctgcgtgaattgcatattcgtgcaacattagtcaaaaaagacaaataa
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