Phascolarctobacterium faecium: PFJ30894_01887
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Entry
PFJ30894_01887 CDS
T05784
Symbol
alkA_2
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFJ30894_01887 (alkA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfac03400
]
PFJ30894_01887 (alkA_2)
Enzymes [BR:
pfac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PFJ30894_01887 (alkA_2)
DNA repair and recombination proteins [BR:
pfac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PFJ30894_01887 (alkA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BBG64239
LinkDB
All DBs
Position
complement(1932380..1933021)
Genome browser
AA seq
213 aa
AA seq
DB search
MLKTPDWAAGAKYLREHAPELIPLIDRFPVCELKPEPKEKYFGTLVTGIVSQQLPPDVSL
QLLEKLGKFLGNPLQPQAVVEVSIEALCEQGLVKQKAEYLKSFAEAAVAGQVTIEKFSEM
TDAEITKQLVQIRGLGQWTIEMFLLLALCRTDVVPSADFIFKKELKELKGLDDIPKRGQI
TTLTETWRPWRSLGVWYLWQEAAFKEQNKKNIK
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaaccccagattgggctgcaggagccaaatatctgcgtgaacatgcgcctgag
ctgatcccattgatcgataggtttcctgtgtgtgaattgaaacctgagccaaaggagaag
tatttcgggacattagttacaggtattgtttcacagcagttaccacctgatgtcagtctg
caattactggaaaaactaggaaaatttttaggaaatccactgcagccacaggcggtagtg
gaagtttccattgaagccttgtgcgaacagggactggtaaaacagaaagccgaatatttg
aaaagttttgctgaagcagctgttgcaggtcaggtaactatagaaaaattttctgaaatg
actgatgctgaaataactaagcagcttgtccaaattcgcggtttagggcagtggactatt
gaaatgtttttattgcttgccttgtgcaggactgatgtagttccttcggcagattttatt
tttaaaaaagaactgaaagagttgaaggggttagatgatatacccaaacgtgggcaaata
actacgcttacagaaacatggcgtccatggcgttctttgggggtttggtatttgtggcag
gaagcagcatttaaagaacaaaataaaaaaaacattaaatga
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