Phascolarctobacterium faecium: PFJ30894_01905
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Entry
PFJ30894_01905 CDS
T05784
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PFJ30894_01905 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfac03400
]
PFJ30894_01905 (recO)
DNA repair and recombination proteins [BR:
pfac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PFJ30894_01905 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PFJ30894_01905 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
BBG64254
LinkDB
All DBs
Position
complement(1951186..1951941)
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AA seq
251 aa
AA seq
DB search
MVLRYKLMSNTAYQDEVIILKVKDWQTADKYAVCFSRAHGKIPFLAYGARYARTTGGRLI
QPFAMLDMQLYSGKRLDSMKSCELIALPQQMDIKQMAYASVIAEVTEALTEAHEPQEDIY
ELLVGAVQILSRNNPRLVALSAICKLLVLTGFAPVYDACVNCTEAVEGDAFFSVVQGGLI
CEACHGGEELPFSSGAQKLLQELIALDFNDPQPFTVRGGDLMQLEQILYRFIVYQIDKPL
KSLSFLAQLGL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggtactgcggtacaagctgatgagtaatactgcatatcaggacgaagtaattatttta
aaagtaaaggattggcagactgcggataaatacgcagtctgtttttcgcgtgcccatggt
aaaataccttttttagcgtacggtgcccgttatgcgaggactactggcggacggctgata
cagccttttgcgatgctcgatatgcagctatattctggtaaacgtctggacagtatgaaa
agctgtgaattgattgctttgccgcagcaaatggacatcaaacagatggcttatgcttcg
gtgattgctgaagtgacagaagctctaacggaagcacatgagccgcaggaagatatttat
gagctgcttgtaggagcagtacaaatactttccaggaataacccgcgtctggtcgcgttg
tcggctatttgcaagctgcttgttttaacaggatttgctcctgtttatgacgcctgtgtc
aactgtactgaagctgttgaaggagatgctttttttagtgtcgttcagggcggccttatt
tgcgaagcctgtcacggaggggaagagttgccctttagcagcggcgctcagaagctgctg
caggagctgattgcgctggatttcaatgatccacagccttttactgtgcgcggcggcgat
ttgatgcagctggaacagatactttatcggtttattgtttaccagatcgacaagcctttg
aaaagtttaagctttttagcgcagttaggattgtaa
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