Phascolarctobacterium faecium: PFJ30894_02086
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Entry
PFJ30894_02086 CDS
T05784
Name
(GenBank) glmZ(sRNA)-inactivating NTPase
KO
K06958
RNase adapter protein RapZ
Organism
pfac
Phascolarctobacterium faecium
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfac03019
]
PFJ30894_02086
Messenger RNA biogenesis [BR:
pfac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PFJ30894_02086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
SKI
AAA_18
AAA_22
AAA_33
nSTAND3
PRK
AAA_16
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
BBG64423
LinkDB
All DBs
Position
complement(2132277..2133143)
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AA seq
288 aa
AA seq
DB search
MEESKFLIITGMSGAGKTQVVRTLEDMNFFCIDNLPPALIPKFAELCRQTQARNTALVVD
VRGGRFFDELIEILDEMKAMGHEYELLYLDASDDSLIRRYKETRRRHPLGQGKSLSENIA
VERERLTEVRNRATHIIDTTDMPTAELKEKIWKLYSGNGGVERMIVLVQSFGFKHGLPLD
SDMVLDVRFLPNPFYEEDLKRLTGNDQPVADFICRFPQTFQFLKKEEEMLEFLLPQYISE
GKSQLVISVGCTGGQHRSVFIANRLYEFLRTQGYAVQLTHRDLQRKNK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatcaaagtttctgatcattacagggatgtccggtgcaggtaaaacacaagtt
gtgcggacgttggaggatatgaattttttctgtattgataatttgccaccggcacttatt
cctaagtttgccgaattatgtcgtcaaacgcaggcccgtaatactgctctggtagtagat
gtacgcggtggtcgtttttttgacgagttgatagaaatattggacgaaatgaaagctatg
ggacatgaatatgaattgttgtatcttgatgcatcggatgatagcttgatcaggcggtat
aaagaaacacgtcgccgtcatccgctcgggcagggtaaaagcctcagtgaaaatattgct
gtagagcgtgagagattgactgaagtacgcaacagggctacacacattatcgatactact
gatatgcctacagcagagctgaaagaaaaaatttggaagttgtattcaggcaatggcggt
gtagagcgcatgattgttttagtacagtcctttggttttaaacacggactgccattagat
agtgatatggtcttagatgtcaggtttttgcccaatccgttttatgaagaagatttaaag
cgtttaactggcaatgaccagccggttgccgattttatttgtcgtttccctcaaacgttt
cagtttctgaaaaaagaagaagaaatgcttgaatttttgttgccacagtacatttccgaa
ggcaaaagccagcttgttataagtgtaggctgtaccgggggacagcatcgttcggtattt
atagcaaatcgattgtatgaatttttgcgtacacagggctatgccgtacagcttactcat
cgtgatctgcagcggaaaaacaaataa
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