Phascolarctobacterium faecium: PFJ30894_02258
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Entry
PFJ30894_02258 CDS
T05784
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PFJ30894_02258 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfac03019
]
PFJ30894_02258 (groL)
03110 Chaperones and folding catalysts [BR:
pfac03110
]
PFJ30894_02258 (groL)
03029 Mitochondrial biogenesis [BR:
pfac03029
]
PFJ30894_02258 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pfac04147
]
PFJ30894_02258 (groL)
Enzymes [BR:
pfac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PFJ30894_02258 (groL)
Messenger RNA biogenesis [BR:
pfac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PFJ30894_02258 (groL)
Chaperones and folding catalysts [BR:
pfac03110
]
Heat shock proteins
HSP60 / Chaperonin
PFJ30894_02258 (groL)
Mitochondrial biogenesis [BR:
pfac03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PFJ30894_02258 (groL)
Exosome [BR:
pfac04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PFJ30894_02258 (groL)
Exosomal proteins of other body fluids (saliva and urine)
PFJ30894_02258 (groL)
Exosomal proteins of breast cancer cells
PFJ30894_02258 (groL)
Exosomal proteins of colorectal cancer cells
PFJ30894_02258 (groL)
Exosomal proteins of bladder cancer cells
PFJ30894_02258 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBG64587
LinkDB
All DBs
Position
complement(2324284..2325915)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKEIKFNEEARRSLERGVNALADAVKVTLGPKGRNVVLEKKFGAPTITNDGVTIARDIE
LEDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMVREGMRNVAAGANPMVLKKGIQ
KAVDVLVEELQAVSKKVETKEAKAQVASISAADEEIGGLIADAMEKVGDDGVITVEESKT
METCLETVEGMQFDRGYISPYMATDPDKMEAVLNNPLVLITDRKITMIQDIMPVLEKVVQ
GGRELLIIAEDIEGEALATLVVNKLRGTFKAVAVKAPGFGDRRKAMLQDIAILTGATVIS
EEVGRKLDSASMEDLGSASQVRVTKELTTIVDGGGNKEEIAARVAQIRAQIPETTSEFDK
EKLQERLAKLAGGVAVIKVGAATEVELKDKKLRIEDALNATRAAVAEGIVAGGGTALLQV
QTALSKIKVTGDEKTGVEIVKRAIEEPVRQIAYNAGLEGAVIVDTIKRSRRGFGFNALTE
EYVDMIEAGIVDPTKVTRSALQNAASIAAMVLTTESVVADKPAKEGAAPMGGMPMGGGMP
GMM
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggaaataaaatttaacgaagaagctcgccgtagtttagaacgcggtgtcaat
gcattagcagatgcagtaaaggtaacccttggtcctaaaggacgtaatgtagtgctcgaa
aagaaatttggcgcgccaactattactaacgatggcgtaactattgcccgtgatattgaa
cttgaagatccgtttgaaaatatgggtgcgcagcttgtaaaagaagttgctacaaaaact
aacgatgttgccggtgacggtactaccactgctactgttttggcacaggctatggttcgt
gagggcatgcgcaatgttgctgccggcgctaatccaatggtgctgaaaaaaggtattcaa
aaagctgttgacgttttggtagaagaactgcaggctgtttctaaaaaggttgagactaaa
gaagctaaagctcaggttgcatctatttctgcagctgatgaagaaatcggcggtctgatt
gctgacgctatggaaaaggtcggcgacgacggtgttattactgttgaagaatccaaaact
atggaaacctgtctggagactgttgaaggtatgcaatttgaccgcggttatatttctcct
tatatggcaacagatcctgataaaatggaagcagttcttaacaacccgctcgtactcatc
acagaccgtaaaattactatgattcaggatattatgcctgtacttgaaaaagtcgtccaa
ggcggccgggaattacttattatcgctgaagatattgaaggcgaagctttggcaactttg
gttgtgaataaacttcgcggtaccttcaaggctgtagctgttaaagctcctggtttcggt
gatcgccgtaaagctatgctgcaggatattgctattcttaccggagcaacagttatcagc
gaagaagttggacgtaagcttgacagcgccagcatggaagatttgggtagcgccagccag
gtccgcgtaaccaaggaattgactactatcgttgatggcggcggtaacaaagaagaaatt
gcagcacgcgttgctcaaatccgtgctcagatccctgaaactacttctgaatttgacaaa
gaaaaattacaagagcgtttggctaaacttgcaggcggcgtagctgttattaaagttggt
gctgctactgaagttgagcttaaagataaaaaactgcgtattgaagatgctttgaacgct
actcgtgcagcagttgctgagggtattgttgcaggcggcggtactgctctgctgcaggtg
caaactgctttaagcaaaatcaaagtaacaggcgacgaaaaaaccggcgtagaaatcgtt
aaacgcgctattgaagaaccggtacgtcaaatagcttataatgccggattggaaggcgca
gttatcgttgatacgattaaacgttcccgcagaggttttggttttaacgctttgaccgag
gaatacgttgatatgatcgaagctggtatcgttgatcctactaaggttacccgcagtgct
ctgcaaaatgcagccagcatcgcagctatggttttgactactgaatctgttgttgctgat
aagcctgcaaaagaaggcgctgctcctatgggtggtatgccgatgggtggcggaatgccg
ggtatgatgtaa
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