Phascolarctobacterium faecium: PFJ30894_02358
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Entry
PFJ30894_02358 CDS
T05784
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pfac
Phascolarctobacterium faecium
Pathway
pfac00300
Lysine biosynthesis
pfac00470
D-Amino acid metabolism
pfac01100
Metabolic pathways
pfac01110
Biosynthesis of secondary metabolites
pfac01120
Microbial metabolism in diverse environments
pfac01230
Biosynthesis of amino acids
Module
pfac_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pfac00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PFJ30894_02358 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PFJ30894_02358 (dapF)
Enzymes [BR:
pfac01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PFJ30894_02358 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
BBG64684
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All DBs
Position
complement(2429656..2430528)
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AA seq
290 aa
AA seq
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MKMEFTKMHGTGNDYVYVNCMEQELPNPGAISEYISHRRFGIGSDGLIMICKSDVADFKM
RIFNADASEAKMCGNGSRCIAKYVYDKGLTDKTTFTLETLSGIKTIDVFLGEDGKVAEAS
IDMGEPIFKCADIPMISDHFMFVDQGLVLEEDVVYNGTAISVGNPHFVTFVDDVDALDLE
KLGPKFEKHKLFPENVNTEFVQVIDKNTVKFRVWERGSGETWACGTGATAVCVATIMLGH
AGKKGEELTVIAKGGTLKLTHLANNHVILRGPAVTVFEGVIDIPDEVINK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggaatttacaaagatgcacggtactggtaacgattatgtttacgtcaactgt
atggaacaggaattgcctaatccgggcgctatttccgaatatatcagccacagacgtttt
ggtattggcagtgatggcctgatcatgatctgtaaatctgacgttgcggattttaaaatg
cgtatttttaacgctgatgcttctgaagccaagatgtgcggtaatgggagcagatgtatc
gccaagtatgtttatgataaaggtctgacggataaaacaacttttacgctggaaacgctc
tccggtatcaaaaccatcgatgtatttttgggtgaagacggtaaagtggcagaagccagt
atcgatatgggcgagcctatttttaaatgtgccgacatccccatgatcagcgatcacttt
atgtttgtagatcagggactggtgctggaagaagacgttgtttataatggtacggctatt
tctgtaggcaatccgcatttcgtcacctttgtagacgatgtagatgctttggatctggaa
aaattagggcctaaatttgaaaaacacaaattatttcctgaaaacgtcaatactgaattt
gtgcaggtaatcgataaaaataccgttaaattccgcgtctgggaacgcggcagcggcgaa
acctgggcctgcggcaccggcgcgacagcagtttgtgttgctactatcatgttgggccat
gcaggtaaaaaaggtgaagaattaacagttatcgccaaaggcggcactctgaagcttacc
catttggccaataaccatgttattttaagaggcccggctgtaactgtatttgaaggcgtc
atcgatattcccgatgaagtcattaataaataa
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