Planococcus faecalis: AJGP001_00590
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Entry
AJGP001_00590 CDS
T04955
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pfae
Planococcus faecalis
Pathway
pfae03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pfae00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AJGP001_00590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfae03021
]
AJGP001_00590
03400 DNA repair and recombination proteins [BR:
pfae03400
]
AJGP001_00590
Enzymes [BR:
pfae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AJGP001_00590
Transcription machinery [BR:
pfae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AJGP001_00590
DNA repair and recombination proteins [BR:
pfae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AJGP001_00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AQU77894
LinkDB
All DBs
Position
118352..121906
Genome browser
AA seq
1184 aa
AA seq
DB search
MVGQLVQYGQHRQRRSFSRISEVLDLPNLIEIQSSSYEWFLEEGLREMFRDISPIEDFTG
NLSLEFVDYSLAEPKYPVDESKERDVTYAAPLRVKVRLHNKETDEVKEQDVFMGDFPLMT
ETGTFVINGAERVIVSQLVRSPSVYFHDKTDKNGKKGFGATVIPNRGAWLEYETDAKDVV
YVRIDRTRKLPVTVLLRALGFGSDQEIIDLLGDNEFLQNTLEKDNTESTEKALLEIYERL
RPGEPPTVESAKSLLYSRFFDPKRYDLANVGRYKMNKKLHIKNRLFNQTIAETLADPETG
EILVEAGTLIDRRVLDRLIPNLENGVGFHTVSQVGGVLEGEVTLQSIKIYAPNNEDQKEI
TVISNAYIEDKIKNVTPADIISSISYFFNLLYGVGNTDDIDHLGNRRLRSVGELLQNQFR
IGLSRMERVVRERMSINDTQAIVPQQLINIRPVIASIKEFFGSSQLSQFMDQTNPLAELT
HKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINTLSTFAKVNKFG
FIETPYRRVDGETGLVTQHIDYLTADEEDNYVVAQANSKLNDDGSFVEEGIVARFRGENT
IYKRGSIDYMDVSPKQVVSVATACIPFLENDDSNRALMGANMQRQAVPLLNPEAPFVGTG
MEHLAARDSGAAVVAKNDGIVEFVEAKEISVRRIEVVDGNEVKGDLDVYRLQKFVRSNQG
TSYNQRPIVKVGDRISKRDILADGPSMERGEMALGRNVLVAFMTWDGFNYEDAIIMSERL
VKDDVYTSVHIEEYESDSRDTKLGPEEITRDIPNVGEDALRNLDDRGIIRVGAEVKDGDI
LVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKIFNREDGDEL
PPGVNQLVRAYIVQKRKISVGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNPLG
VPSRMNIGQVLELHLGMASRSLGIHMASSVFDGANEEDVLETMEESGMPLDGKTILYDGR
SGEAFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVW
ALEAYGAAHTLQEILTVKSDDVVGRVKTYEAIVKGESVPEPSVPESFKVLIKELQSLGMD
VKMLTIDDEEIELRDLDEEEDLQPADSLNILPIADKEAPVGTID
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
ttggtaggtcaactagttcagtacggtcaacatcgtcaacgcagaagtttttcgagaatc
agtgaagtgctggatcttccgaacttgatcgaaattcaatcatcatcttatgaatggttt
ctcgaagaagggcttcgcgaaatgttccgagatatttcaccgattgaagatttcacaggg
aatctatcactcgagtttgttgattacagtctcgcggaaccgaagtatccagtcgatgaa
tcgaaagagcgcgacgttacttacgcagcacctttgcgtgttaaagtgcgtctgcacaac
aaagaaacagacgaagtaaaagagcaggatgtcttcatgggagatttcccattaatgaca
gaaacgggtactttcgtcatcaatggcgcagaacgcgttatcgtttcccagttagttcgt
tcgccaagtgtttatttccacgacaagacagataaaaatggtaaaaaaggctttggagca
actgttatacctaaccgtggagcatggttggagtacgaaacagatgcgaaagatgtcgtg
tatgtcagaattgatcgtacacgtaaattgccagtaacagttcttttaagagctcttgga
tttggatcagaccaagaaatcattgatttgcttggagataacgaattccttcaaaacaca
cttgaaaaagataatacagagagcacagaaaaggcgcttcttgaaatttatgaacgcttg
cgccctggtgagccaccaacggttgaaagtgcgaagagcttactatattcacgctttttc
gatccaaaacgctatgacttagcaaatgttggtcgctacaaaatgaacaaaaagctccat
attaaaaaccgtcttttcaaccaaacaattgccgaaacattggcagatcctgaaacaggt
gaaattttagttgaagcagggacattaattgatcgtcgtgtactggatcgtttaattcca
aacttagaaaacggtgttggtttccatacggtttctcaagtaggtggcgttctagaaggt
gaagttactttacagtcgattaaaatttatgcgccgaacaacgaagatcaaaaagaaatc
accgtgattagtaatgcttatatagaagataagattaaaaatgtaacgccagcggatatt
atttcttctattagttacttctttaaccttctttacggtgttggaaacacagatgacatt
gatcatcttggtaaccgccgtttgcgttcagtaggtgagcttttacaaaaccaattccgt
attggtttgtctcgtatggagcgcgtcgtgcgtgagcgtatgtcgattaacgatacacaa
gccatcgtacctcaacaattgatcaatatccgcccggttattgcatcaattaaagagttc
ttcggtagttctcagctttctcagtttatggatcaaacgaatccacttgctgaattgaca
cacaaacgccgtctatcggctcttgggcccggtggtttaacgcgtgaacgtgcaggtttt
gaagtgcgtgacgttcactattcacattatggccgtatgtgtccaattgaaacgcctgag
ggcccgaacattggattgatcaatacactttcaacatttgcgaaagtgaataagtttggt
ttcattgaaactccttatcgtcgtgtagatggtgaaactggcttagttacacagcatatt
gattacttgactgcggatgaagaagataactatgtagtcgctcaagctaactcgaaatta
aatgacgatggatcatttgttgaagaaggcattgtggcacgtttccgcggggaaaacaca
atttacaaacgcggcagcattgactatatggatgtttctccgaagcaggtcgtttccgta
gcaacagcttgtattccatttctagaaaacgatgactccaaccgagcattaatgggagcg
aacatgcaacgtcaagcagttcctttgttaaatccggaagctccttttgtaggaactgga
atggaacatttggcggcacgtgattctggtgcagctgtggtggcaaaaaatgacggtatt
gtagagtttgtggaagcaaaagaaatttcagttcgccgcatcgaagttgtggatggcaat
gaagttaagggtgacttggatgtctacagattgcagaaattcgttcgttcgaaccaaggg
acaagttataaccaacgcccaatcgttaaagttggagaccgtatttctaaacgtgatatt
ctagccgatggaccttcaatggagcgcggagagatggcattgggaagaaacgtattggta
gccttcatgacgtgggacggctttaactacgaagatgcgatcatcatgagtgaacgttta
gtgaaagacgatgtttacacatctgtccacatagaagagtacgaatctgattcacgtgat
acaaaacttggaccagaagaaattacgcgcgatattccgaacgtaggggaagacgcatta
cgtaacttggatgaccgtggaattatccgtgtcggagctgaagtaaaagatggagatatt
ctagttggtaaagtaacacctaaaggcgttactgaattaactgctgaagaacgtcttctt
catgctatttttggtgaaaaagcacgcgaagttcgcgatacatcgttgcgagttcctcac
ggtgctggcggtattgtattggacgttaaaatcttcaaccgtgaagatggagatgaacta
ccaccgggtgttaatcagctagtccgcgcatacatcgttcagaaacgtaaaatttctgtg
ggtgataaaatggccggtcgtcacggaaacaaaggtgttatttcaaggattttacctgaa
gaagatatgccatttatgcctgatggcacaccagtcgacattatgttgaacccactgggt
gtaccgtctcgtatgaatatcggtcaggtgcttgaattgcatcttggaatggcttctcgt
tcacttggaattcatatggcttcatctgtatttgatggagcgaatgaagaagatgtgttg
gaaacaatggaagagtcaggtatgccacttgatggtaagacgattctctatgatggtcgt
tctggggaagcgttcgataaccgtgtgtctgtagggattatgtacatgatcaaacttgct
cacatggttgacgataaattgcatgcccgttcaactggaccttactcattggttactcaa
caaccactgggtggtaaagcacaattcggtggacagcgttttggtgagatggaagtatgg
gcactagaagcatatggtgctgcacatacattacaagaaatcttaacagtcaagtcggat
gatgttgtaggtcgtgtgaaaacgtatgaagcaattgttaagggcgaaagtgtaccggaa
ccaagtgtgccggaatcatttaaagttctaatcaaagagcttcaaagtttaggtatggac
gttaagatgttgacgattgatgatgaagaaattgaattacgcgatttggatgaagaagaa
gatcttcagcctgcggattcattgaatatcctaccaatcgcagataaagaagcaccggtt
ggaacaattgattaa
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