Planococcus faecalis: AJGP001_01925
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Entry
AJGP001_01925 CDS
T04955
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pfae
Planococcus faecalis
Brite
KEGG Orthology (KO) [BR:
pfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfae03400
]
AJGP001_01925
DNA repair and recombination proteins [BR:
pfae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AJGP001_01925
Archaeal homologous recombinant proteins
AJGP001_01925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AQU78136
LinkDB
All DBs
Position
367514..370606
Genome browser
AA seq
1030 aa
AA seq
DB search
MRPLKLKMTAFGPYKNTEEIDFADLQGNQLFVISGSTGSGKTTIFDGICFALYGSASGSD
RSESRILRSDFADDTTHTCIEMEFEIHGKIYRILRQMGHVKKGNKSATGERYEFFERIDG
VEKPCVERQIVSEINRRVEEIIGLTQNQFSQIVMLPQGEFRKLLTSETDNKEEILRKIFK
TEPYKLISERLKQKKDAAVKVFEREQHDLNIHLQRIMSSLPKRDSELFDVLNREHKNVHQ
VLSGLEKETSFYKEKINADEQHYQSVYKQHGDKMNAYHEAKMWNDRFEELNTKKVQLERL
QQQQAEYTEKEATLQSAERASYIAGIENLFHELSADETKKKVELVDSIRQQEQAQQTKLS
AEKQFIAQQELQGERDKLREQISDLEKLWPAIQELEKKKGNLVSLEKELQQSELHLKHAE
KEFTVQKNEKQDLDEKITKLEVSLETADETQQQLMAVTEKAKLTAEFILLKQQKQQQQVV
QEAKKTDFEQVELSYRQLESRWFTNQAHILAAQLHDGEACPVCGSLDHPGMDLKTEEQPV
SKEQVEMAKFDFDLVDTEYRNGSAKLFALQEQLENKQIELTNVNLNAQQAEVQSRQLEQT
KRQLTEQMTEQQAAKLDVRKWKEQLANCSRKIEELERNSRGLVEEVQKKQSSYFAAKAVF
ENELAAVPENLRELSVLEQQLQQVSSRKQQLEQSWTSAQEQFQKSKEKLASTLVSVNHAK
DVAEEIAQKREKAQQQFTEALTKSSFDSEAAYQQAKISDTAFTTLKKEILEFNQTRHTLS
QQVNELNEKLATQSFKDLSQAQEELVELKDAYEQALAERNRSRDFEKIGLELIERIHGVI
ESALVAEQNLNRIADLHDMIRGQNGLKISFERYLQIEYLEQIILSANERLKNLSNGQFHL
IRSDRQESRGKQSGLGLDVYDAYTGQTRDVKTMSGGEKFNASLCLALGMADVIQSFQGNV
SIDTMFIDEGFGSLDEESLNKSIETLIDLQKSGRMIGVISHVQELKAAIPAILEVKKSKE
GHSRTKFLIK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgagacctttaaagctaaagatgacggcattcggtccttataaaaatacagaagaaatt
gattttgctgatttgcagggcaatcagctattcgtcatttcaggtagcacaggttcaggc
aagacgaccatttttgatggcatttgttttgctttatacggttctgctagtggttcggac
cgcagcgagtcacgcatattaagaagtgattttgcagatgacacgacccacacttgtatt
gaaatggaatttgaaatacacggcaaaatctatcgtattttgcgtcaaatgggtcacgtg
aaaaaaggcaataaaagcgcaacgggcgaacgttatgaattctttgaacgcattgacgga
gttgaaaagccttgtgttgagcggcaaattgtttcggaaataaatcgacgtgttgaggaa
attattggactgacacaaaatcaatttagtcaaattgttatgttgccacaaggtgaattt
cgtaaattactaacttctgaaacagataataaagaagagattttacgtaaaatattcaag
acagagccatataaattgatcagtgaacggctcaaacaaaaaaaagatgccgctgttaaa
gttttcgaacgtgagcaacatgacttgaatatccatctccaacgcatcatgtcgtcattg
ccaaaacgagattctgaactgttcgacgtattaaatcgagaacacaagaatgttcatcaa
gtgttgtcaggactggagaaagaaactagcttttacaaagaaaaaatcaatgcggatgaa
cagcattatcaaagtgtctataaacagcatggtgacaaaatgaatgcttatcacgaggca
aaaatgtggaatgatcgctttgaagaactgaatacgaaaaaagtacagcttgagcggctg
caacagcagcaagcagaatatacagaaaaagaagcaactttacaatcggccgaacgtgcc
agttatattgcaggcattgaaaacttgtttcatgaattaagtgctgatgaaacgaagaaa
aaagtagagttagtagattcaatccgccagcaagaacaggcacaacaaacaaagctttct
gctgaaaagcagtttattgcacaacaagaacttcaaggtgaacgggacaagctacgtgag
caaattagtgatttggaaaaactatggccggccattcaagagctagaaaagaaaaaagga
aacctagtcagccttgagaaagaattacagcagtcagaactccatttaaagcacgctgaa
aaagagttcactgttcagaaaaacgaaaagcaagacttagatgaaaaaattactaaatta
gaagtttctctggaaacagctgatgaaacgcagcaacagctaatggcagtcacggagaag
gctaagttaacggctgagttcattttactgaaacagcaaaaacagcagcagcaagttgtt
caagaagcgaaaaagacagactttgaacaagtagagctttcttaccgccaactagaatcg
cgatggtttaccaatcaagcgcatattttagccgctcaattgcatgacggagaggcttgt
cctgtttgtggaagtttagaccatccgggtatggacttgaaaacagaagaacaacctgta
tccaaagaacaagtggagatggcaaaattcgattttgacttagtggatacggaataccgc
aatggatcagcaaaattgtttgctttgcaagagcaactggaaaataaacagatagaactc
acaaacgtaaacctgaatgcccagcaggctgaagtgcagtcgcgtcagctggaacaaaca
aagcgtcagttaacagagcaaatgacagagcagcaggccgccaaactagatgtgcggaag
tggaaagaacaactggctaattgttcccgtaaaatagaagaactggagcggaatagccgt
ggattggttgaagaggtgcagaaaaagcaatcttcttattttgcagctaaagctgttttt
gaaaacgaactggctgcggttccagaaaatttacgagagctctctgttttagaacagcag
ttgcagcaagtttcttcacgcaagcagcagttggaacaaagctggactagcgctcaagag
cagttccaaaagtcgaaagaaaagctagctagtacgttggtttccgtcaatcacgctaaa
gacgtagcagaagaaatagcgcaaaaaagagaaaaagcgcaacaacagtttacggaagct
ttaacgaaatcatcctttgattcggaagcagcgtatcagcaggcaaaaatatcagacacc
gcatttacaacattgaaaaaagagattcttgaattcaatcaaacccgtcatactttatcg
caacaagtgaacgagcttaacgaaaagcttgcgactcagagtttcaaagatttgagtcaa
gcacaggaagagttggttgaactgaaagatgcgtacgagcaagcacttgcagaacgcaat
cgatcacgcgatttcgaaaaaatcgggttagagttaatcgagcgtattcatggggtgatt
gaaagtgcacttgtagccgaacagaatttgaatcgaattgctgatttgcatgacatgatt
cgcggacagaacggcttaaagatttcatttgaacgttatttgcaaatcgaatatttggag
caaattatcttgtcggccaacgaacggctgaaaaatttatccaatggtcaatttcatttg
attcgcagtgaccgtcaagaatcccgtggcaaacaaagtggattgggtctagacgtttac
gatgcttacacaggacagacgcgtgatgtgaaaaccatgtcgggtggagaaaaattcaac
gcctcattatgtttagcactcggaatggcggacgtcattcaaagtttccaaggcaatgtc
tcaattgacacaatgtttatcgacgaaggctttggttcactcgatgaagaatcgcttaat
aaatcaattgaaaccttgattgacttgcaaaaatcaggacgaatgattggtgttatctca
catgtgcaagaactgaaagctgcgattccggctatactggaagtcaaaaaatcaaaagaa
ggacatagccgcacaaaatttcttatcaaataa
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