Planococcus faecalis: AJGP001_02730
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Entry
AJGP001_02730 CDS
T04955
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
pfae
Planococcus faecalis
Brite
KEGG Orthology (KO) [BR:
pfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pfae03021
]
AJGP001_02730
Transcription machinery [BR:
pfae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AJGP001_02730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
DUF1492
HTH_37
HTH_23
GerE
DUF134
HTH_3
HNF-1_N
KORA
Phage_rep_O
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AQU78289
LinkDB
All DBs
Position
529356..530138
Genome browser
AA seq
260 aa
AA seq
DB search
MSKQSHPNQPTKEQVLDWIEAYQKTEDEEAQTNLVLNYKRLVESIARKYSNGKSYHEDIA
QVGMLGLLGAIRRYDPSFGRSFEAFAVPTIIGEIKRFLRDKTWAIHVPRRIKELGPRIKA
TVEVLTRELQRSPQVWEIAEYLDVEEDDILEAMEMGKSYQALSMDHSLEADSDGSTVTLF
DVVGQEDDGYEKVDQRMLVAEAMNVLSEREKQIIQFTYIEQLSQKQAGDKLGISQMHVSR
LQRKAIKKLQEAILAAGGVL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacagtctcatcctaatcaacctactaaagagcaggtgcttgattggattgaa
gcttaccaaaagacggaagatgaagaagcccaaacaaatttggtgctaaattataagcgc
cttgttgaatccattgcgcgaaagtactcaaatgggaaatcgtatcacgaagatattgcg
caagtaggcatgcttggacttttaggggctatcagacggtacgatccatcatttggtcgt
agctttgaggcttttgctgtgcctacaattatcggagaaattaaacgatttttgcgtgat
aagacttgggcaatccatgttccacgacggataaaagaattagggccccgtattaaagcg
acggttgaggtgttaacaagagagcttcaacgttcgccgcaagtgtgggaaattgccgaa
tacctggatgttgaagaagatgacattttagaagcaatggaaatgggtaaaagctatcaa
gcactttcgatggaccactctttagaggcggattcagacggtagtaccgtcacattattt
gatgtagtaggccaggaagacgatggttacgagaaagtggatcagcggatgcttgtagct
gaagcgatgaacgtgctttctgagcgagaaaagcaaatcatccaattcacttacatagag
cagctgagccaaaaacaagccggagacaagcttggtatttctcaaatgcacgtttcccgg
ttacagagaaaagctattaaaaaactccaagaagctatcttagcagcgggcggagttttg
tag
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integrated database retrieval system
