Planococcus faecalis: AJGP001_04740
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Entry
AJGP001_04740 CDS
T04955
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pfae
Planococcus faecalis
Brite
KEGG Orthology (KO) [BR:
pfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfae03009
]
AJGP001_04740
Enzymes [BR:
pfae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
AJGP001_04740
Ribosome biogenesis [BR:
pfae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AJGP001_04740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Met_10
PrmA
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
RrnaAD
Methyltransf_11
TPMT
PCMT
N6_N4_Mtase
Methyltransf_32
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AQU78641
LinkDB
All DBs
Position
970188..971552
Genome browser
AA seq
454 aa
AA seq
DB search
MKPVNKNDRLTVHVEDLTHDGAGVAKVDGYPLFIPGALPGEDVSVHVLKTLKSYGFAKLI
EIQQASPFRVTAPCPVFDTCGGCQIQHLSYEGQMTFKRKLVRDAITRIGKLPDVPVHPVK
GMEDPWRYRNKSQIPFGTQDGKVVAGFYQPRSHDIADTDTCLIQTPEADAIMVALKNNLV
EIGIEPYEEATHRGMLRHVVVRKARATGEIMVVLVTKKKKFAHSARAIELIQATVPEVTS
IVQNINHEKTNVIFGDETVTLWGKDVIEDRIGNVRFEISARSFYQINPIQTEILYGQALE
YAQLTGQETVIDAYCGIGTISLFLAKQAKFVMGVEIVPQAIEDAKRNAELNGLTNTLFEA
GPAEQVIPRWYKEGKQADVLVVDPPRKGCDEQLLRTILKQRPSRVVYVSCNPATLARDLR
ILEDGGYRTKEVQPVDMFPQTTHCEAVAWLELEK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccagtaaacaaaaacgatcgactaacggtccatgtagaagatttgacacatgac
ggtgcaggcgtagcaaaagttgatggctatccgctgtttatcccaggcgctttgccagga
gaagatgtctcggtccatgtgttaaaaaccttgaaatcttatggctttgcaaagctaatc
gaaatacagcaagcttcaccttttcgtgttacagctccgtgtccagtgtttgatacatgt
ggaggctgtcaaattcagcacttgtcctacgaaggacagatgacttttaaacgaaaatta
gtgcgggacgcgattacgcgtatcggtaaattaccagatgtgccggtacatccagttaaa
ggtatggaagatccgtggcgctaccgcaataaatctcaaattccttttggtacacaagac
ggcaaagtggtcgctggattttatcagccgcgttctcatgacattgcagatacggataca
tgtttgattcaaacacctgaagcagatgcgattatggtcgctttgaaaaacaacttagtg
gaaataggcattgaaccttacgaagaagccacacaccgcggtatgcttcgccacgtagta
gttcggaaagctcgagcgactggagaaattatggtcgttttagtcactaagaaaaagaaa
tttgctcattcagcacgagcaattgaattgattcaagcaactgttccagaagtgacatcg
attgtccaaaacatcaaccatgaaaaaaccaatgttatttttggtgacgaaaccgtaacg
ctttggggcaaagatgtgattgaagatcggatcggtaacgttcgttttgaaatttcagca
cgctctttttatcaaatcaacccgatacaaacagaaattctttacggtcaagcgcttgaa
tacgctcaattaacgggacaggagaccgtcattgatgcgtattgtggcattgggacgatt
tctctgttccttgcaaagcaagctaaatttgttatgggtgtagaaattgttcctcaagcg
attgaagatgctaaacgcaacgctgaactaaatggtttaacgaatactttatttgaagca
ggacctgcggaacaagtgattccgcgctggtacaaagaaggcaagcaggcggatgtttta
gtggtcgatccaccacgtaaaggctgtgatgagcagttgctacggactattctcaagcag
cgtccatcgcgtgttgtttatgtatcgtgtaacccggctacacttgcgcgtgacttgcgc
atattagaagatggtggctaccgcacaaaagaagtacagcctgttgatatgttcccacag
acaacgcattgtgaagcagtggcttggctagagctagaaaaataa
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