Planococcus faecalis: AJGP001_07415
Help
Entry
AJGP001_07415 CDS
T04955
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pfae
Planococcus faecalis
Pathway
pfae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pfae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AJGP001_07415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfae03400
]
AJGP001_07415
Enzymes [BR:
pfae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AJGP001_07415
DNA repair and recombination proteins [BR:
pfae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AJGP001_07415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
HHH_5
AAA_16
AAA_28
UvrD-helicase
nSTAND3
AAA
AAA_14
TsaE
Phage_Mu_Gam
AAA_25
NPHP3_N
AAA_18
NACHT
NTPase_1
AAA_5
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AQU79100
LinkDB
All DBs
Position
1482239..1484656
Genome browser
AA seq
805 aa
AA seq
DB search
MTGQIDLFQEEKQFVLGRPVVSIFHNPQNLFSIAKVKIQETNTPYTEKEIIVSGYFPMLT
LEEQYRFTGVVKNHPRYGVQFQVETFTKEVPETEQGIIHYLSSDMFNGIGRKTAETIVKK
LGKDAIKKILEDPDALDKVPRLSDDKKDTIRATLQMNLGLERVMIQLNDWGFGPQVGMRI
YQAYREETIEILTKNPFQLIEEIEGIGFQRADELGTKLGITGSHPDRIKAAILHILNQAS
LSEGHVYVDAKTLIPLVKEMLESRQQGEIAIEAISKAAIELNEESKVAGEETRLYLPSLY
YSEVGIATKLETLLAEQENRTKFPSSEVRKALGEAEERLGVNYAETQVDAIENSINSSVM
ILTGGPGTGKTTVVRGLVEIYAELHGLSLDPKEYAKKKEPFPIILAAPTGRAAKRLSEST
DLPAMTIHRLLGFNGQEKDEETEKEIEGKLIIIDEMSMVDTWLAHQLLKAVPEDAQLIFV
GDQDQLPPVGPGQVLRDLLESKRIPTVELTDIYRQASGSSIIELAHQMKNGQLPEDITVK
TADRSFIKAGADQIPAVVEKVVRSALSKGHSIKDIQVLAPMYKGPAGIDALNRLIQEMVN
PNPDGKRKELAFGDITYRIGDKVLQLVNQPESNVFNGDMGEIVAIMKAKETVEKQDMLVA
SFDGIEVTYERSDLNQLTLAYCCSIHKSQGSEFPTVIMPVVRGYMKMLRRNLLYTGITRS
RDFLILCGDPSVFRYGVERTDDAQRMTTLKSRLAVTTEQPKTEQQTKQQVETEQSGPVSL
TAENVHAIHPMIGMEGITPQKFMEA
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacaaatcgatttatttcaagaagaaaaacagtttgtattagggcgtcctgtc
gtctcgatttttcacaatcctcaaaacttattctccatagccaaagtgaaaattcaagaa
accaacaccccgtacactgaaaaagaaattattgtatctggctattttccgatgttaacg
ctcgaagaacagtatcgttttacaggcgtcgtgaaaaatcatccgcgttatggtgttcaa
ttccaagtagaaacgtttacgaaagaagtaccagaaaccgaacaaggaattattcattac
ttgtccagtgatatgtttaatggcattggccggaaaacagcagaaacaatcgtcaaaaaa
ctcggcaaagatgcgattaagaaaattcttgaagaccctgatgcattagataaagtgccg
cggttgtcagatgataaaaaagacaccattcgcgcgactttacagatgaatctcggtctg
gagcgtgtgatgattcagctcaacgactggggctttggccctcaagtgggcatgcgtatt
tatcaagcttaccgcgaagaaaccattgaaattttgacgaaaaatcccttccagctgatt
gaagaaatcgaaggaatcggttttcaacgtgccgacgaactcggaaccaagcttggcatc
actggcagtcatccggaccgaatcaaagcggcaattttgcacattctgaaccaagcttct
ctgtctgaaggccatgtctatgtagacgctaaaaccttgattccgctagttaaggaaatg
ctcgaatcacgtcagcaaggagaaattgcgattgaagcgatttcgaaagccgctatcgaa
ttaaatgaagaaagtaaagtcgcaggcgaagaaacgcggctttatttgccatcgctgtat
tattcagaagttggaattgcgacgaaactggaaactttactggccgaacaagaaaatcgc
acaaagtttccaagttcagaagttcgtaaagcgcttggtgaagcagaggaacgtcttggt
gtgaattatgcagaaacgcaagttgacgcgattgaaaacagtattaattcatcggtcatg
attttaacgggtggaccgggtaccggtaagaccacggttgtccgcggattggtggaaatc
tatgcagaactgcacgggttgtcactcgatccgaaagaatacgccaagaaaaaagagccg
tttcccattatcctagcagcaccaacgggacgtgcggccaagcgcttgagtgaatccact
gacctaccggcaatgacaatccaccgtttattaggctttaatggccaagaaaaagacgaa
gaaaccgaaaaagaaatcgaaggcaaattaattattatcgatgaaatgtcgatggttgat
acgtggcttgctcatcaactgctaaaagcagtaccagaagacgcacagctaattttcgtt
ggagaccaagatcaattgccgccggttggtcccggacaagtgctaagagatttactcgaa
tcaaaacggattccaactgttgagctaaccgatatttaccgacaagcgtcaggttcctcc
atcattgaactcgcccatcaaatgaaaaatggacaattgcctgaagacatcactgtaaag
acggccgatcgttcatttatcaaagcgggagccgaccaaattcctgctgttgttgaaaaa
gttgtgaggagtgccttgtcgaaaggtcattcgattaaagacatccaagtgcttgctccg
atgtataaaggaccagctggaatcgatgctttgaaccgtctgattcaagaaatggtcaac
ccgaatccggatggcaaacgaaaagaattagcatttggtgacattacgtaccgcattggc
gataaagtgttgcagctcgtcaatcaaccagaaagcaatgtctttaatggtgacatgggt
gaaattgtcgctattatgaaagccaaagaaaccgttgaaaaacaagacatgttagtagca
tcttttgatggcattgaagtaacttatgaacgtagcgatttaaaccaactcacgctagcg
tactgttgttcaatccataagtcacaaggatctgaatttccaaccgtcatcatgccagta
gttcggggctacatgaaaatgttgcgccgcaatttgctttacacgggcattacccggagt
agggattttcttattctctgtggagatccaagcgtcttccgttacggagttgaacgcacg
gacgacgcacagcgcatgaccacattaaaaagccgtctagcggtcacaaccgaacaacca
aaaaccgaacaacaaacaaagcaacaagtcgagacagaacagagcggtcccgtcagttta
actgccgaaaatgtccacgccatccatccaatgattggcatggaaggcattactccacaa
aagtttatggaagcttga
DBGET
integrated database retrieval system
