Planococcus faecalis: AJGP001_11215
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Entry
AJGP001_11215 CDS
T04955
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pfae
Planococcus faecalis
Pathway
pfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AJGP001_11215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfae03019
]
AJGP001_11215
03016 Transfer RNA biogenesis [BR:
pfae03016
]
AJGP001_11215
Enzymes [BR:
pfae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AJGP001_11215
Messenger RNA biogenesis [BR:
pfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AJGP001_11215
Transfer RNA biogenesis [BR:
pfae03016
]
Prokaryotic type
tRNA degradation factors
AJGP001_11215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
S1_2
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AQU79800
LinkDB
All DBs
Position
complement(2206051..2208168)
Genome browser
AA seq
705 aa
AA seq
DB search
MEQTKKVYTLDWAGRELQVEVGQLAKQANGAALIRYGDTAVLSTATASKTPKPLDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKATLTSRLIDRPIRPLFPDGFRNEVQVISMVMSV
DQDCPSEMAAMFGSSLALMISDIPFGGPIAGVIVGLIDGQYIINPTNEQLEQSSINLIVA
GTKDAINMVEAGAKEVSEEIILEAIMFGHEEIKKLIAFQEQIAAEVGKAKTDIKLYELDA
ELTSSIKEAVETDLNAAVQINEKQARNEAIDEVKARAMAAYEESEDAVKKQAGQILDKMV
KEEVRRLITDEKIRPDGRGPSEIRPLSSEVGVLNRTHGSGLFTRGQTQAMSICTLGALGD
VQIIDGLGIEDTKRFMHHYNFPLFSVGETGFLRGPGRREIGHGALGERALEAVIPNEKDF
PYTIRLVAEVLESNGSTSQASICASTLAMMDAGVPLTAPVAGIAMGLVKKGENYTVLSDI
QGMEDYLGDMDFKVAGTAKGITALQMDIKIDGLSREILEEALAQAQIGRIHILESMLATI
AEPRTTLSKYAPKIIMVKINPDKIRDVIGPGGKVINKIIDETGVKIDTEQNGTIFISSVD
EEMNAKAKAMIENIVREAKVGEYYEGKVKRIEKFGAFVELFPGKDGLLHISEIQEERTKE
VEDVLKMDQVIQVKVIEIDRQGRVNLSRKIVLKEQKEAAEKQDQE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacaaaaaaagtttacacacttgattgggctggccgcgagttgcaagttgag
gtcggtcaattagcaaaacaagcaaacggagcagcgttaatccgttatggcgatacagca
gttttatctacggcaacggcatcaaaaacgccgaaacctttagattttttcccgttgact
gttaactacgaagaacgtctttacgctgtcggtaaaattcctggtggtttcattaaacgt
gaaggccgtccatctgaaaaagcgacgttaacaagtcgtttaatcgatcgtccgatccgt
ccattattcccagacggtttccgtaacgaagtccaagtgatttcaatggttatgtctgtc
gatcaggattgcccgtcagaaatggctgcaatgttcggttcttcacttgcattaatgatc
tcagatattccttttggtggaccgattgctggagtcattgttgggttaatcgacggacaa
tacatcatcaacccaacaaatgaacaacttgagcaaagctcgattaacttgatcgtagct
ggtacaaaagatgcgatcaacatggttgaagcaggagcaaaagaagtttctgaagaaatc
attttagaagctattatgttcggtcacgaagaaatcaagaaattgatcgctttccaagaa
cagattgctgcagaagttggtaaagcaaaaacagatatcaaattgtatgaattagatgca
gaattgacatcttctattaaagaagctgtggaaactgacttaaacgctgctgttcaaatt
aacgaaaaacaagcgcgcaacgaagcaatagatgaagttaaagcacgtgcaatggctgca
tatgaagagtcagaagatgcagttaagaagcaagctggccaaattcttgataaaatggtc
aaagaagaagttcgccgcctaattacagacgaaaaaattcgtccggatggccgtggacct
tctgaaattcgtccattgtcttctgaagtcggtgttcttaaccgcacacacggctcagga
ttgtttactcgtggacaaacgcaagcaatgagtatttgtacactaggtgcattaggcgat
gttcaaattattgatggccttggcattgaagatacaaaacgctttatgcatcattacaac
ttcccgttgttctcggttggtgaaactggattccttcgtggaccaggacgccgcgaaatc
ggtcacggggcacttggtgaacgtgcattagaagcggttattccaaacgaaaaagatttc
ccttacacaattcgtcttgttgcagaagtacttgaatcgaatggttcaacttcacaagca
agtatttgtgcgtcaacacttgcgatgatggatgcaggtgtacctttaactgctccagtt
gcaggtattgcaatgggtctagtgaaaaaaggcgaaaactatactgttctttctgacatt
caaggaatggaagattatcttggcgatatggactttaaagtagcgggtactgcaaaaggc
attacggctcttcaaatggacattaaaatcgacggtctttctcgtgaaattttggaagag
gcattggcacaagctcaaatcggtcgtattcatattctggaatccatgcttgcgacgatt
gctgaaccgagaacgactctttctaaatatgcaccgaaaattatcatggtgaagatcaac
ccagacaagatccgcgatgttattggacctggtggtaaagtgatcaacaaaatcattgat
gaaacgggcgttaagattgataccgaacaaaacggtacaatcttcatttcatctgttgat
gaagaaatgaacgcgaaagcgaaagcaatgattgaaaacatcgttcgcgaggcgaaagtc
ggcgaatattacgaaggcaaagtgaagcgaattgagaagttcggtgcatttgttgaattg
ttccctggcaaagacggtcttcttcatatttctgaaatccaagaagaacggactaaagaa
gtagaagacgttttgaaaatggatcaagtcattcaagtcaaagtaattgaaattgaccgt
caaggccgtgtaaacttgtcacgtaagattgttttaaaagaacaaaaagaagctgctgaa
aaacaagaccaagaataa
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